Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 AL033527.3-201ENST00000566366 1196 ntBASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 C17orf82-201ENST00000623772 1530 ntBASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SND1-IT1Q9HBX3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 AL499627.2-201ENST00000606283 725 ntBASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SND1-IT1Q9HBX3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 AC092028.1-203ENST00000608262 953 ntBASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.01□□□□□ -0.17
SND1-IT1Q9HBX3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 AC090340.1-201ENST00000620778 4980 ntBASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 AC079089.2-201ENST00000531211 1277 ntBASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 MTDHP2-201ENST00000601468 714 ntBASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SND1-IT1Q9HBX3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms