Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM2Q9C040 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRIM2Q9C040 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRIM2Q9C040 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM2Q9C040 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM2Q9C040 AF106564.1-201ENST00000607058 2553 ntBASIC19.3■□□□□ 0.68
TRIM2Q9C040 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM2Q9C040 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM2Q9C040 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM2Q9C040 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRIM2Q9C040 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM2Q9C040 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM2Q9C040 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM2Q9C040 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 IRS3P-201ENST00000223076 1006 ntBASIC19.29■□□□□ 0.68
TRIM2Q9C040 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 MIR5787-201ENST00000611784 55 ntBASIC19.29■□□□□ 0.68
TRIM2Q9C040 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM2Q9C040 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM2Q9C040 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM2Q9C040 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM2Q9C040 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM2Q9C040 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM2Q9C040 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM2Q9C040 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM2Q9C040 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM2Q9C040 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
TRIM2Q9C040 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM2Q9C040 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM2Q9C040 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM2Q9C040 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM2Q9C040 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM2Q9C040 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM2Q9C040 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM2Q9C040 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM2Q9C040 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM2Q9C040 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM2Q9C040 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM2Q9C040 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM2Q9C040 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM2Q9C040 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM2Q9C040 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM2Q9C040 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM2Q9C040 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 AC012414.1-201ENST00000556676 535 ntBASIC19.27■□□□□ 0.68
TRIM2Q9C040 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM2Q9C040 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM2Q9C040 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM2Q9C040 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.27■□□□□ 0.67
TRIM2Q9C040 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.27■□□□□ 0.67
TRIM2Q9C040 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM2Q9C040 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
TRIM2Q9C040 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRIM2Q9C040 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TRIM2Q9C040 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
TRIM2Q9C040 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM2Q9C040 MIR6821-201ENST00000617625 74 ntBASIC19.26■□□□□ 0.67
TRIM2Q9C040 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM2Q9C040 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM2Q9C040 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM2Q9C040 AL049796.1-201ENST00000565336 1766 ntBASIC19.26■□□□□ 0.67
TRIM2Q9C040 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM2Q9C040 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM2Q9C040 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM2Q9C040 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM2Q9C040 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM2Q9C040 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM2Q9C040 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms