Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.55■□□□□ 0.4
PCGF1Q9BSM1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 AC104187.1-201ENST00000607510 612 ntBASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 RARRES2P11-201ENST00000635158 484 ntBASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCGF1Q9BSM1 AC055733.4-201ENST00000638462 1354 ntBASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 AC090192.1-201ENST00000517740 490 ntBASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.53■□□□□ 0.4
PCGF1Q9BSM1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCGF1Q9BSM1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCGF1Q9BSM1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.52■□□□□ 0.39
PCGF1Q9BSM1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCGF1Q9BSM1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCGF1Q9BSM1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCGF1Q9BSM1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.51■□□□□ 0.39
PCGF1Q9BSM1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms