Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.48■□□□□ 0.87
PKP4Q99569 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.48■□□□□ 0.87
PKP4Q99569 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.48■□□□□ 0.87
PKP4Q99569 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.48■□□□□ 0.87
PKP4Q99569 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.48■□□□□ 0.87
PKP4Q99569 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.48■□□□□ 0.87
PKP4Q99569 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.48■□□□□ 0.87
PKP4Q99569 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.48■□□□□ 0.87
PKP4Q99569 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.48■□□□□ 0.87
PKP4Q99569 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PKP4Q99569 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.47■□□□□ 0.87
PKP4Q99569 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.47■□□□□ 0.87
PKP4Q99569 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PKP4Q99569 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PKP4Q99569 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.47■□□□□ 0.87
PKP4Q99569 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.47■□□□□ 0.87
PKP4Q99569 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.47■□□□□ 0.87
PKP4Q99569 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PKP4Q99569 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.47■□□□□ 0.87
PKP4Q99569 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PKP4Q99569 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.47■□□□□ 0.87
PKP4Q99569 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PKP4Q99569 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PKP4Q99569 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.47■□□□□ 0.87
PKP4Q99569 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PKP4Q99569 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PKP4Q99569 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.46■□□□□ 0.87
PKP4Q99569 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PKP4Q99569 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.46■□□□□ 0.87
PKP4Q99569 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.46■□□□□ 0.87
PKP4Q99569 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PKP4Q99569 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PKP4Q99569 AC138907.5-202ENST00000569484 235 ntBASIC20.46■□□□□ 0.87
PKP4Q99569 NTF6G-201ENST00000591094 616 ntBASIC20.46■□□□□ 0.87
PKP4Q99569 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PKP4Q99569 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.46■□□□□ 0.87
PKP4Q99569 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PKP4Q99569 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.46■□□□□ 0.87
PKP4Q99569 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.46■□□□□ 0.87
PKP4Q99569 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PKP4Q99569 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.45■□□□□ 0.86
PKP4Q99569 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.45■□□□□ 0.86
PKP4Q99569 MIR935-201ENST00000401179 91 ntBASIC20.45■□□□□ 0.86
PKP4Q99569 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.45■□□□□ 0.86
PKP4Q99569 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.45■□□□□ 0.86
PKP4Q99569 AC061975.6-201ENST00000579045 1553 ntBASIC20.45■□□□□ 0.86
PKP4Q99569 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PKP4Q99569 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PKP4Q99569 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PKP4Q99569 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PKP4Q99569 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
PKP4Q99569 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.44■□□□□ 0.86
PKP4Q99569 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.44■□□□□ 0.86
PKP4Q99569 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PKP4Q99569 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PKP4Q99569 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PKP4Q99569 FEM1AP4-201ENST00000443167 1987 ntBASIC20.44■□□□□ 0.86
PKP4Q99569 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PKP4Q99569 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PKP4Q99569 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PKP4Q99569 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.44■□□□□ 0.86
PKP4Q99569 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PKP4Q99569 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PKP4Q99569 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PKP4Q99569 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PKP4Q99569 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PKP4Q99569 AC010141.2-201ENST00000452426 721 ntBASIC20.43■□□□□ 0.86
PKP4Q99569 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.43■□□□□ 0.86
PKP4Q99569 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.43■□□□□ 0.86
PKP4Q99569 AP001160.3-201ENST00000601484 763 ntBASIC20.43■□□□□ 0.86
PKP4Q99569 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PKP4Q99569 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PKP4Q99569 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PKP4Q99569 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PKP4Q99569 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PKP4Q99569 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PKP4Q99569 AL024507.2-201ENST00000606070 2574 ntBASIC20.42■□□□□ 0.86
PKP4Q99569 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP4Q99569 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP4Q99569 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
PKP4Q99569 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP4Q99569 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PKP4Q99569 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP4Q99569 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.42■□□□□ 0.86
PKP4Q99569 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP4Q99569 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP4Q99569 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PKP4Q99569 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PKP4Q99569 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PKP4Q99569 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.42■□□□□ 0.86
PKP4Q99569 MIR5787-201ENST00000611784 55 ntBASIC20.42■□□□□ 0.86
PKP4Q99569 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms