Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.66■■□□□ 1.54
SMARCC2Q8TAQ2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SMARCC2Q8TAQ2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
SMARCC2Q8TAQ2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.65■■□□□ 1.54
SMARCC2Q8TAQ2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMARCC2Q8TAQ2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SMARCC2Q8TAQ2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.65■■□□□ 1.54
SMARCC2Q8TAQ2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SMARCC2Q8TAQ2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMARCC2Q8TAQ2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC2Q8TAQ2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
SMARCC2Q8TAQ2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.64■■□□□ 1.54
SMARCC2Q8TAQ2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC2Q8TAQ2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC2Q8TAQ2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.64■■□□□ 1.54
SMARCC2Q8TAQ2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.64■■□□□ 1.54
SMARCC2Q8TAQ2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC2Q8TAQ2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SMARCC2Q8TAQ2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SMARCC2Q8TAQ2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
SMARCC2Q8TAQ2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
SMARCC2Q8TAQ2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.63■■□□□ 1.53
SMARCC2Q8TAQ2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.62■■□□□ 1.53
SMARCC2Q8TAQ2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 AC079140.4-201ENST00000507448 529 ntBASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC2Q8TAQ2 AL049796.1-201ENST00000565336 1766 ntBASIC24.6■■□□□ 1.53
SMARCC2Q8TAQ2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMARCC2Q8TAQ2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMARCC2Q8TAQ2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.6■■□□□ 1.53
SMARCC2Q8TAQ2 AC022517.1-201ENST00000592429 346 ntBASIC24.6■■□□□ 1.53
SMARCC2Q8TAQ2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMARCC2Q8TAQ2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.6■■□□□ 1.53
SMARCC2Q8TAQ2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.6■■□□□ 1.53
SMARCC2Q8TAQ2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMARCC2Q8TAQ2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.59■■□□□ 1.53
SMARCC2Q8TAQ2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMARCC2Q8TAQ2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMARCC2Q8TAQ2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SMARCC2Q8TAQ2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SMARCC2Q8TAQ2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMARCC2Q8TAQ2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMARCC2Q8TAQ2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.58■■□□□ 1.53
SMARCC2Q8TAQ2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms