Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX31Q8N9S9 AP006587.3-201ENST00000525742 1516 ntBASIC20.68■□□□□ 0.9
SNX31Q8N9S9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX31Q8N9S9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 AL121603.2-201ENST00000557373 2117 ntBASIC20.66■□□□□ 0.9
SNX31Q8N9S9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 AC142381.2-201ENST00000566120 298 ntBASIC20.66■□□□□ 0.9
SNX31Q8N9S9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX31Q8N9S9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 AC003102.1-202ENST00000563394 1796 ntBASIC20.65■□□□□ 0.9
SNX31Q8N9S9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX31Q8N9S9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SNX31Q8N9S9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.64■□□□□ 0.9
SNX31Q8N9S9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.64■□□□□ 0.9
SNX31Q8N9S9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNX31Q8N9S9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 MIR572-201ENST00000384983 95 ntBASIC20.64■□□□□ 0.89
SNX31Q8N9S9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 SUDS3P1-201ENST00000505831 966 ntBASIC20.64■□□□□ 0.89
SNX31Q8N9S9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNX31Q8N9S9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SNX31Q8N9S9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX31Q8N9S9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX31Q8N9S9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX31Q8N9S9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX31Q8N9S9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX31Q8N9S9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
SNX31Q8N9S9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX31Q8N9S9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms