Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 AC034268.1-201ENST00000441047 882 ntBASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATPAF2Q8N5M1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 CLDN5-201ENST00000403084 2357 ntBASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 AC004854.2-201ENST00000608450 1441 ntBASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATPAF2Q8N5M1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 AC104187.1-201ENST00000607510 612 ntBASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATPAF2Q8N5M1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 AC026271.2-201ENST00000428091 497 ntBASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 AC138907.5-202ENST00000569484 235 ntBASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATPAF2Q8N5M1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 AC008175.2-201ENST00000612840 297 ntBASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
ATPAF2Q8N5M1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATPAF2Q8N5M1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATPAF2Q8N5M1 AP004607.4-201ENST00000530158 1459 ntBASIC21.52■■□□□ 1.03
ATPAF2Q8N5M1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 AC010141.2-201ENST00000452426 721 ntBASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ATPAF2Q8N5M1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms