Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 UNC93B3-201ENST00000308076 687 ntBASIC21.04■□□□□ 0.96
RAPH1Q70E73 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.04■□□□□ 0.96
RAPH1Q70E73 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPH1Q70E73 BX842568.3-201ENST00000418104 571 ntBASIC21.04■□□□□ 0.96
RAPH1Q70E73 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.04■□□□□ 0.96
RAPH1Q70E73 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 MIR4767-201ENST00000582827 78 ntBASIC21.04■□□□□ 0.96
RAPH1Q70E73 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.04■□□□□ 0.96
RAPH1Q70E73 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.04■□□□□ 0.96
RAPH1Q70E73 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.04■□□□□ 0.96
RAPH1Q70E73 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPH1Q70E73 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPH1Q70E73 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPH1Q70E73 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RAPH1Q70E73 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPH1Q70E73 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPH1Q70E73 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPH1Q70E73 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RAPH1Q70E73 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPH1Q70E73 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPH1Q70E73 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RAPH1Q70E73 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPH1Q70E73 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPH1Q70E73 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPH1Q70E73 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RAPH1Q70E73 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPH1Q70E73 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPH1Q70E73 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPH1Q70E73 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPH1Q70E73 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RAPH1Q70E73 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPH1Q70E73 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPH1Q70E73 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPH1Q70E73 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.02■□□□□ 0.95
RAPH1Q70E73 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RAPH1Q70E73 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.01■□□□□ 0.95
RAPH1Q70E73 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.01■□□□□ 0.95
RAPH1Q70E73 AC126544.1-201ENST00000580842 1059 ntBASIC21.01■□□□□ 0.95
RAPH1Q70E73 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.01■□□□□ 0.95
RAPH1Q70E73 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPH1Q70E73 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPH1Q70E73 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21■□□□□ 0.95
RAPH1Q70E73 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
RAPH1Q70E73 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
RAPH1Q70E73 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RAPH1Q70E73 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RAPH1Q70E73 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21■□□□□ 0.95
RAPH1Q70E73 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21■□□□□ 0.95
RAPH1Q70E73 SMUG1P1-201ENST00000590640 811 ntBASIC21■□□□□ 0.95
RAPH1Q70E73 AC233992.3-201ENST00000607491 485 ntBASIC21■□□□□ 0.95
RAPH1Q70E73 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21■□□□□ 0.95
RAPH1Q70E73 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 AL049796.1-201ENST00000565336 1766 ntBASIC21■□□□□ 0.95
RAPH1Q70E73 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAPH1Q70E73 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAPH1Q70E73 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPH1Q70E73 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPH1Q70E73 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPH1Q70E73 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 AL136162.1-201ENST00000607711 1078 ntBASIC20.99■□□□□ 0.95
RAPH1Q70E73 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAPH1Q70E73 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RAPH1Q70E73 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms