Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.39■■□□□ 1.01
CASC4Q6P4E1 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.39■■□□□ 1.01
CASC4Q6P4E1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CASC4Q6P4E1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CASC4Q6P4E1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 TSPY26P-201ENST00000476365 1326 ntBASIC21.38■■□□□ 1.01
CASC4Q6P4E1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CASC4Q6P4E1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CASC4Q6P4E1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 AC106739.1-201ENST00000617035 715 ntBASIC21.36■■□□□ 1.01
CASC4Q6P4E1 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 AC105233.4-201ENST00000642045 216 ntBASIC21.36■■□□□ 1.01
CASC4Q6P4E1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.36■■□□□ 1.01
CASC4Q6P4E1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.35■■□□□ 1.01
CASC4Q6P4E1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 AC009237.3-201ENST00000393279 1427 ntBASIC21.34■■□□□ 1.01
CASC4Q6P4E1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CASC4Q6P4E1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 EDA-201ENST00000338901 1233 ntBASIC21.33■■□□□ 1.01
CASC4Q6P4E1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.33■■□□□ 1.01
CASC4Q6P4E1 AP001330.3-201ENST00000520123 633 ntBASIC21.33■■□□□ 1.01
CASC4Q6P4E1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 1039.1 ms