Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 AC126544.1-201ENST00000580842 1059 ntBASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 GABARAPL3-202ENST00000624044 1851 ntBASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDKAL1Q5VV42 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 AC073314.1-201ENST00000568729 2216 ntBASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 AC135279.3-201ENST00000610945 1311 ntBASIC23.05■■□□□ 1.28
CDKAL1Q5VV42 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDKAL1Q5VV42 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 AC005224.4-201ENST00000583262 1652 ntBASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CDKAL1Q5VV42 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDKAL1Q5VV42 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDKAL1Q5VV42 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
CDKAL1Q5VV42 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CDKAL1Q5VV42 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
CDKAL1Q5VV42 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDKAL1Q5VV42 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDKAL1Q5VV42 AC121338.2-201ENST00000622535 1744 ntBASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms