Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
EFNB1P98172 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
EFNB1P98172 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
EFNB1P98172 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
EFNB1P98172 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.83■□□□□ 0.61
EFNB1P98172 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.83■□□□□ 0.61
EFNB1P98172 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EFNB1P98172 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EFNB1P98172 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
EFNB1P98172 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
EFNB1P98172 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
EFNB1P98172 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
EFNB1P98172 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB1P98172 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNB1P98172 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB1P98172 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
EFNB1P98172 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
EFNB1P98172 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNB1P98172 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.83■□□□□ 0.6
EFNB1P98172 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
EFNB1P98172 AC011298.3-201ENST00000615796 283 ntBASIC18.83■□□□□ 0.6
EFNB1P98172 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB1P98172 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
EFNB1P98172 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB1P98172 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
EFNB1P98172 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
EFNB1P98172 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.83■□□□□ 0.6
EFNB1P98172 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
EFNB1P98172 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB1P98172 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.83■□□□□ 0.6
EFNB1P98172 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
EFNB1P98172 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.82■□□□□ 0.6
EFNB1P98172 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
EFNB1P98172 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
EFNB1P98172 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 AC133561.4-201ENST00000566112 224 ntBASIC18.82■□□□□ 0.6
EFNB1P98172 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.82■□□□□ 0.6
EFNB1P98172 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB1P98172 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EFNB1P98172 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
EFNB1P98172 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB1P98172 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB1P98172 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNB1P98172 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.81■□□□□ 0.6
EFNB1P98172 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB1P98172 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.81■□□□□ 0.6
EFNB1P98172 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.81■□□□□ 0.6
EFNB1P98172 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.81■□□□□ 0.6
EFNB1P98172 DUX4L19-201ENST00000557448 1267 ntBASIC18.81■□□□□ 0.6
EFNB1P98172 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB1P98172 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNB1P98172 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.81■□□□□ 0.6
EFNB1P98172 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNB1P98172 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
EFNB1P98172 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB1P98172 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB1P98172 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB1P98172 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.81■□□□□ 0.6
EFNB1P98172 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
EFNB1P98172 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EFNB1P98172 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.8■□□□□ 0.6
EFNB1P98172 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.8■□□□□ 0.6
EFNB1P98172 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.8■□□□□ 0.6
EFNB1P98172 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB1P98172 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.8■□□□□ 0.6
EFNB1P98172 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB1P98172 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EFNB1P98172 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.8■□□□□ 0.6
EFNB1P98172 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
EFNB1P98172 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.8■□□□□ 0.6
EFNB1P98172 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
EFNB1P98172 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
EFNB1P98172 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB1P98172 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB1P98172 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.8■□□□□ 0.6
EFNB1P98172 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
EFNB1P98172 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EFNB1P98172 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.8■□□□□ 0.6
EFNB1P98172 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EFNB1P98172 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB1P98172 AC007952.6-201ENST00000573168 2673 ntBASIC18.79■□□□□ 0.6
EFNB1P98172 AC003957.1-201ENST00000625108 2673 ntBASIC18.79■□□□□ 0.6
EFNB1P98172 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
EFNB1P98172 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.79■□□□□ 0.6
EFNB1P98172 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB1P98172 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB1P98172 GUSBP5-201ENST00000418136 578 ntBASIC18.79■□□□□ 0.6
EFNB1P98172 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB1P98172 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms