Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL162430.1-201ENST00000480705 870 ntBASIC18.83■□□□□ 0.6
H3F3AP84243 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.83■□□□□ 0.6
H3F3AP84243 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
H3F3AP84243 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3AP84243 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
H3F3AP84243 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
H3F3AP84243 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3AP84243 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3AP84243 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
H3F3AP84243 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3AP84243 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
H3F3AP84243 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
H3F3AP84243 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
H3F3AP84243 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.82■□□□□ 0.6
H3F3AP84243 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.82■□□□□ 0.6
H3F3AP84243 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.82■□□□□ 0.6
H3F3AP84243 AP001160.3-201ENST00000601484 763 ntBASIC18.82■□□□□ 0.6
H3F3AP84243 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.82■□□□□ 0.6
H3F3AP84243 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.82■□□□□ 0.6
H3F3AP84243 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
H3F3AP84243 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3F3AP84243 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.81■□□□□ 0.6
H3F3AP84243 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
H3F3AP84243 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.81■□□□□ 0.6
H3F3AP84243 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 POU5F1P4-201ENST00000413175 1085 ntBASIC18.81■□□□□ 0.6
H3F3AP84243 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
H3F3AP84243 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
H3F3AP84243 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3F3AP84243 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
H3F3AP84243 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.8■□□□□ 0.6
H3F3AP84243 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.8■□□□□ 0.6
H3F3AP84243 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.8■□□□□ 0.6
H3F3AP84243 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.8■□□□□ 0.6
H3F3AP84243 KRT18P20-201ENST00000548986 1279 ntBASIC18.8■□□□□ 0.6
H3F3AP84243 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.8■□□□□ 0.6
H3F3AP84243 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3F3AP84243 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
H3F3AP84243 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.79■□□□□ 0.6
H3F3AP84243 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
H3F3AP84243 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.79■□□□□ 0.6
H3F3AP84243 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 AC008175.2-201ENST00000612840 297 ntBASIC18.79■□□□□ 0.6
H3F3AP84243 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 AC061975.6-201ENST00000579045 1553 ntBASIC18.79■□□□□ 0.6
H3F3AP84243 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3F3AP84243 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.79■□□□□ 0.6
H3F3AP84243 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
H3F3AP84243 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
H3F3AP84243 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3F3AP84243 AC026310.3-201ENST00000625186 2373 ntBASIC18.78■□□□□ 0.6
H3F3AP84243 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3F3AP84243 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3F3AP84243 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3F3AP84243 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3F3AP84243 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3F3AP84243 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
H3F3AP84243 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.78■□□□□ 0.6
H3F3AP84243 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms