Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 MLH1YMR167W 2310 nt2.86□□□□□ -1.95
RTR1P40084 NET1YJL076W 3570 nt2.86□□□□□ -1.95
RTR1P40084 SAP190YKR028W 3102 nt2.86□□□□□ -1.95
RTR1P40084 SRP68YPL243W 1800 nt2.85□□□□□ -1.95
RTR1P40084 YDR535CYDR535C 501 nt2.85□□□□□ -1.95
RTR1P40084 VMA5YKL080W 1179 nt2.85□□□□□ -1.95
RTR1P40084 YAL069WYAL069W 315 nt2.85□□□□□ -1.95
RTR1P40084 LCL2YLR104W 396 nt2.85□□□□□ -1.95
RTR1P40084 YLR230WYLR230W 306 nt2.85□□□□□ -1.95
RTR1P40084 GAB1YLR459W 1185 nt2.85□□□□□ -1.95
RTR1P40084 COS1YNL336W 1146 nt2.85□□□□□ -1.95
RTR1P40084 DGK1YOR311C 873 nt2.85□□□□□ -1.95
RTR1P40084 YPL035CYPL035C 348 nt2.85□□□□□ -1.95
RTR1P40084 LCL1YPL056C 306 nt2.85□□□□□ -1.95
RTR1P40084 REV3YPL167C 4515 nt2.85□□□□□ -1.95
RTR1P40084 SAS4YDR181C 1446 nt2.85□□□□□ -1.95
RTR1P40084 YKR078WYKR078W 1758 nt2.84□□□□□ -1.95
RTR1P40084 SRB8YCR081W 4284 nt2.84□□□□□ -1.95
RTR1P40084 DSE4YNR067C 3354 nt2.84□□□□□ -1.95
RTR1P40084 YCK2YNL154C 1641 nt2.84□□□□□ -1.95
RTR1P40084 YEL075CYEL075C 369 nt2.84□□□□□ -1.95
RTR1P40084 CAJ1YER048C 1176 nt2.84□□□□□ -1.95
RTR1P40084 PEX14YGL153W 1026 nt2.84□□□□□ -1.95
RTR1P40084 YLR076CYLR076C 423 nt2.84□□□□□ -1.95
RTR1P40084 ICY1YMR195W 384 nt2.84□□□□□ -1.95
RTR1P40084 RPL20AYMR242C 519 nt2.84□□□□□ -1.95
RTR1P40084 ALG14YBR070C 714 nt2.84□□□□□ -1.95
RTR1P40084 TFC3YAL001C 3483 nt2.84□□□□□ -1.95
RTR1P40084 21S_rRNA21S_rRNA 3296 nt2.83□□□□□ -1.96
RTR1P40084 YDR222WYDR222W 1248 nt2.83□□□□□ -1.96
RTR1P40084 YGR160WYGR160W 612 nt2.83□□□□□ -1.96
RTR1P40084 AYR1YIL124W 894 nt2.83□□□□□ -1.96
RTR1P40084 CPR7YJR032W 1182 nt2.83□□□□□ -1.96
RTR1P40084 LAC1YKL008C 1257 nt2.83□□□□□ -1.96
RTR1P40084 RDN58-1RDN58-1 158 nt2.83□□□□□ -1.96
RTR1P40084 RDN58-2RDN58-2 158 nt2.83□□□□□ -1.96
RTR1P40084 DNL4YOR005C 2835 nt2.83□□□□□ -1.96
RTR1P40084 YBL005W-AYBL005W-A 1323 nt2.83□□□□□ -1.96
RTR1P40084 YMR046CYMR046C 1323 nt2.83□□□□□ -1.96
RTR1P40084 RDS2YPL133C 1341 nt2.83□□□□□ -1.96
RTR1P40084 YDR034C-DYDR034C-D 5313 nt2.82□□□□□ -1.96
RTR1P40084 PSY2YNL201C 2577 nt2.82□□□□□ -1.96
RTR1P40084 EAP1YKL204W 1899 nt2.82□□□□□ -1.96
RTR1P40084 MON1YGL124C 1935 nt2.82□□□□□ -1.96
RTR1P40084 NUP170YBL079W 4509 nt2.82□□□□□ -1.96
RTR1P40084 SSE1YPL106C 2082 nt2.82□□□□□ -1.96
RTR1P40084 ERP3YDL018C 678 nt2.82□□□□□ -1.96
RTR1P40084 YDL050CYDL050C 372 nt2.82□□□□□ -1.96
RTR1P40084 RPS24AYER074W 408 nt2.82□□□□□ -1.96
RTR1P40084 YBL028CYBL028C 321 nt2.82□□□□□ -1.96
RTR1P40084 MET6YER091C 2304 nt2.81□□□□□ -1.96
RTR1P40084 PRP8YHR165C 7242 nt2.81□□□□□ -1.96
RTR1P40084 snR57snR57 88 nt2.81□□□□□ -1.96
RTR1P40084 RRP42YDL111C 798 nt2.81□□□□□ -1.96
RTR1P40084 YER079C-AYER079C-A 339 nt2.81□□□□□ -1.96
RTR1P40084 VPS51YKR020W 495 nt2.81□□□□□ -1.96
RTR1P40084 FLO11YIR019C 4104 nt2.81□□□□□ -1.96
RTR1P40084 PLM2YDR501W 1566 nt2.81□□□□□ -1.96
RTR1P40084 SSY1YDR160W 2559 nt2.81□□□□□ -1.96
RTR1P40084 BNI4YNL233W 2679 nt2.81□□□□□ -1.96
RTR1P40084 YKL100CYKL100C 1764 nt2.8□□□□□ -1.96
RTR1P40084 GCN4YEL009C 846 nt2.8□□□□□ -1.96
RTR1P40084 IRC6YFR043C 714 nt2.8□□□□□ -1.96
RTR1P40084 YAL059C-AYAL059C-A 423 nt2.8□□□□□ -1.96
RTR1P40084 ATP11YNL315C 957 nt2.8□□□□□ -1.96
RTR1P40084 ARA1YBR149W 1035 nt2.8□□□□□ -1.96
RTR1P40084 SPB1YCL054W 2526 nt2.8□□□□□ -1.96
RTR1P40084 SPF1YEL031W 3648 nt2.79□□□□□ -1.96
RTR1P40084 URK1YNR012W 1506 nt2.79□□□□□ -1.96
RTR1P40084 CTH1YDR151C 978 nt2.79□□□□□ -1.96
RTR1P40084 PEX4YGR133W 552 nt2.79□□□□□ -1.96
RTR1P40084 YHR097CYHR097C 1101 nt2.79□□□□□ -1.96
RTR1P40084 SOL3YHR163W 750 nt2.79□□□□□ -1.96
RTR1P40084 RPC17YJL011C 486 nt2.79□□□□□ -1.96
RTR1P40084 ATP7YKL016C 525 nt2.79□□□□□ -1.96
RTR1P40084 SRN2YLR119W 642 nt2.79□□□□□ -1.96
RTR1P40084 INP1YMR204C 1263 nt2.79□□□□□ -1.96
RTR1P40084 MPD2YOL088C 834 nt2.79□□□□□ -1.96
RTR1P40084 RPN4YDL020C 1596 nt2.78□□□□□ -1.96
RTR1P40084 DNF1YER166W 4716 nt2.78□□□□□ -1.96
RTR1P40084 UBP15YMR304W 3693 nt2.78□□□□□ -1.96
RTR1P40084 IZH1YDR492W 951 nt2.78□□□□□ -1.96
RTR1P40084 YGL101WYGL101W 648 nt2.78□□□□□ -1.96
RTR1P40084 TAN1YGL232W 870 nt2.78□□□□□ -1.96
RTR1P40084 YGR073CYGR073C 372 nt2.78□□□□□ -1.96
RTR1P40084 YGR190CYGR190C 366 nt2.78□□□□□ -1.96
RTR1P40084 UBC12YLR306W 567 nt2.78□□□□□ -1.96
RTR1P40084 YNL203CYNL203C 612 nt2.78□□□□□ -1.96
RTR1P40084 MPS1YDL028C 2295 nt2.78□□□□□ -1.96
RTR1P40084 UTP22YGR090W 3714 nt2.78□□□□□ -1.97
RTR1P40084 PKP2YGL059W 1476 nt2.77□□□□□ -1.97
RTR1P40084 MUS81YDR386W 1899 nt2.77□□□□□ -1.97
RTR1P40084 HPA3YEL066W 540 nt2.77□□□□□ -1.97
RTR1P40084 YIL102C-AYIL102C-A 228 nt2.77□□□□□ -1.97
RTR1P40084 INO4YOL108C 456 nt2.77□□□□□ -1.97
RTR1P40084 ATG29YPL166W 642 nt2.77□□□□□ -1.97
RTR1P40084 APD1YBR151W 951 nt2.77□□□□□ -1.97
RTR1P40084 SWC4YGR002C 1431 nt2.76□□□□□ -1.97
RTR1P40084 ALK2YBL009W 2031 nt2.76□□□□□ -1.97
RTR1P40084 PUT3YKL015W 2940 nt2.76□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 9.9 ms