Protein–RNA interactions for Protein: P20061

TCN1, Transcobalamin-1, humanhuman

Predicted RBP Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1P20061 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCN1P20061 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.11■□□□□ 0.81
TCN1P20061 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCN1P20061 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.11■□□□□ 0.81
TCN1P20061 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.11■□□□□ 0.81
TCN1P20061 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCN1P20061 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TCN1P20061 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.11■□□□□ 0.81
TCN1P20061 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCN1P20061 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.11■□□□□ 0.81
TCN1P20061 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCN1P20061 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TCN1P20061 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.1■□□□□ 0.81
TCN1P20061 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TCN1P20061 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TCN1P20061 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TCN1P20061 AC092028.1-203ENST00000608262 953 ntBASIC20.1■□□□□ 0.81
TCN1P20061 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.1■□□□□ 0.81
TCN1P20061 AP005212.1-201ENST00000581547 1997 ntBASIC20.1■□□□□ 0.81
TCN1P20061 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.1■□□□□ 0.81
TCN1P20061 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCN1P20061 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.09■□□□□ 0.81
TCN1P20061 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 GABARAPL3-202ENST00000624044 1851 ntBASIC20.09■□□□□ 0.81
TCN1P20061 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TCN1P20061 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.09■□□□□ 0.81
TCN1P20061 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 AC239859.2-201ENST00000444165 318 ntBASIC20.09■□□□□ 0.81
TCN1P20061 MTDHP2-201ENST00000601468 714 ntBASIC20.09■□□□□ 0.81
TCN1P20061 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TCN1P20061 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.09■□□□□ 0.81
TCN1P20061 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.09■□□□□ 0.81
TCN1P20061 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.09■□□□□ 0.81
TCN1P20061 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.09■□□□□ 0.81
TCN1P20061 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.09■□□□□ 0.81
TCN1P20061 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TCN1P20061 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCN1P20061 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.08■□□□□ 0.81
TCN1P20061 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCN1P20061 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCN1P20061 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCN1P20061 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCN1P20061 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.08■□□□□ 0.81
TCN1P20061 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCN1P20061 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TCN1P20061 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TCN1P20061 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCN1P20061 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCN1P20061 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.08■□□□□ 0.8
TCN1P20061 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TCN1P20061 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCN1P20061 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCN1P20061 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCN1P20061 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TCN1P20061 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 AC133637.1-201ENST00000624115 1537 ntBASIC20.07■□□□□ 0.8
TCN1P20061 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TCN1P20061 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TCN1P20061 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.07■□□□□ 0.8
TCN1P20061 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.07■□□□□ 0.8
TCN1P20061 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.07■□□□□ 0.8
TCN1P20061 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCN1P20061 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.07■□□□□ 0.8
TCN1P20061 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
TCN1P20061 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCN1P20061 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms