Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.66■□□□□ 0.58
CTLA4P16410 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.66■□□□□ 0.58
CTLA4P16410 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTLA4P16410 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTLA4P16410 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.65■□□□□ 0.58
CTLA4P16410 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTLA4P16410 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTLA4P16410 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTLA4P16410 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTLA4P16410 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.65■□□□□ 0.58
CTLA4P16410 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTLA4P16410 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.65■□□□□ 0.58
CTLA4P16410 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.65■□□□□ 0.58
CTLA4P16410 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.65■□□□□ 0.58
CTLA4P16410 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.65■□□□□ 0.58
CTLA4P16410 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.65■□□□□ 0.58
CTLA4P16410 TPRG1LP1-201ENST00000598702 760 ntBASIC18.65■□□□□ 0.58
CTLA4P16410 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.65■□□□□ 0.58
CTLA4P16410 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTLA4P16410 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.65■□□□□ 0.58
CTLA4P16410 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
CTLA4P16410 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.65■□□□□ 0.58
CTLA4P16410 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTLA4P16410 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CTLA4P16410 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CTLA4P16410 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTLA4P16410 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.64■□□□□ 0.58
CTLA4P16410 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTLA4P16410 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTLA4P16410 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTLA4P16410 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.64■□□□□ 0.57
CTLA4P16410 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTLA4P16410 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.64■□□□□ 0.57
CTLA4P16410 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.64■□□□□ 0.57
CTLA4P16410 MIR6084-201ENST00000622012 110 ntBASIC18.64■□□□□ 0.57
CTLA4P16410 AL358852.1-201ENST00000623174 1268 ntBASIC18.64■□□□□ 0.57
CTLA4P16410 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CTLA4P16410 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.64■□□□□ 0.57
CTLA4P16410 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.64■□□□□ 0.57
CTLA4P16410 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTLA4P16410 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.64■□□□□ 0.57
CTLA4P16410 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTLA4P16410 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTLA4P16410 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTLA4P16410 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CTLA4P16410 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.63■□□□□ 0.57
CTLA4P16410 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.63■□□□□ 0.57
CTLA4P16410 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CTLA4P16410 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTLA4P16410 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.63■□□□□ 0.57
CTLA4P16410 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.63■□□□□ 0.57
CTLA4P16410 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTLA4P16410 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.63■□□□□ 0.57
CTLA4P16410 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CTLA4P16410 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.62■□□□□ 0.57
CTLA4P16410 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.62■□□□□ 0.57
CTLA4P16410 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.62■□□□□ 0.57
CTLA4P16410 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.62■□□□□ 0.57
CTLA4P16410 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.62■□□□□ 0.57
CTLA4P16410 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 AC105265.2-201ENST00000467189 838 ntBASIC18.62■□□□□ 0.57
CTLA4P16410 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.62■□□□□ 0.57
CTLA4P16410 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.62■□□□□ 0.57
CTLA4P16410 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CTLA4P16410 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTLA4P16410 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTLA4P16410 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTLA4P16410 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTLA4P16410 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTLA4P16410 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CTLA4P16410 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTLA4P16410 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CTLA4P16410 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.61■□□□□ 0.57
CTLA4P16410 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTLA4P16410 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTLA4P16410 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTLA4P16410 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.61■□□□□ 0.57
CTLA4P16410 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.61■□□□□ 0.57
CTLA4P16410 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.61■□□□□ 0.57
CTLA4P16410 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.61■□□□□ 0.57
CTLA4P16410 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTLA4P16410 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTLA4P16410 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms