Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTSDP07339 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTSDP07339 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTSDP07339 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CTSDP07339 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CTSDP07339 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.43■□□□□ 0.38
CTSDP07339 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTSDP07339 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CTSDP07339 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.43■□□□□ 0.38
CTSDP07339 AP004607.7-201ENST00000527152 1677 ntBASIC17.43■□□□□ 0.38
CTSDP07339 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTSDP07339 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.43■□□□□ 0.38
CTSDP07339 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTSDP07339 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.43■□□□□ 0.38
CTSDP07339 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CTSDP07339 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.43■□□□□ 0.38
CTSDP07339 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTSDP07339 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CTSDP07339 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTSDP07339 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.42■□□□□ 0.38
CTSDP07339 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.42■□□□□ 0.38
CTSDP07339 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.42■□□□□ 0.38
CTSDP07339 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.42■□□□□ 0.38
CTSDP07339 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTSDP07339 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTSDP07339 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTSDP07339 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.41■□□□□ 0.38
CTSDP07339 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CTSDP07339 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.41■□□□□ 0.38
CTSDP07339 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTSDP07339 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.41■□□□□ 0.38
CTSDP07339 AC009299.2-201ENST00000482477 511 ntBASIC17.41■□□□□ 0.38
CTSDP07339 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTSDP07339 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.41■□□□□ 0.38
CTSDP07339 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTSDP07339 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.41■□□□□ 0.38
CTSDP07339 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTSDP07339 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTSDP07339 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTSDP07339 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTSDP07339 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.4■□□□□ 0.38
CTSDP07339 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CTSDP07339 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTSDP07339 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CTSDP07339 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CTSDP07339 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CTSDP07339 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.4■□□□□ 0.38
CTSDP07339 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTSDP07339 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CTSDP07339 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTSDP07339 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTSDP07339 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTSDP07339 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.39■□□□□ 0.38
CTSDP07339 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CTSDP07339 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.39■□□□□ 0.37
CTSDP07339 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTSDP07339 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.39■□□□□ 0.37
CTSDP07339 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.39■□□□□ 0.37
CTSDP07339 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.39■□□□□ 0.37
CTSDP07339 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CTSDP07339 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSDP07339 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms