Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.67■■□□□ 1.22
HLA-DRAP01903 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HLA-DRAP01903 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
HLA-DRAP01903 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HLA-DRAP01903 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
HLA-DRAP01903 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.67■■□□□ 1.22
HLA-DRAP01903 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DRAP01903 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DRAP01903 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DRAP01903 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.66■■□□□ 1.22
HLA-DRAP01903 AL162430.1-201ENST00000480705 870 ntBASIC22.66■■□□□ 1.22
HLA-DRAP01903 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.66■■□□□ 1.22
HLA-DRAP01903 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.66■■□□□ 1.22
HLA-DRAP01903 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DRAP01903 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HLA-DRAP01903 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.65■■□□□ 1.22
HLA-DRAP01903 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
HLA-DRAP01903 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HLA-DRAP01903 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
HLA-DRAP01903 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.65■■□□□ 1.22
HLA-DRAP01903 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.65■■□□□ 1.22
HLA-DRAP01903 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.65■■□□□ 1.22
HLA-DRAP01903 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.65■■□□□ 1.22
HLA-DRAP01903 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HLA-DRAP01903 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
HLA-DRAP01903 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.65■■□□□ 1.22
HLA-DRAP01903 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.65■■□□□ 1.22
HLA-DRAP01903 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HLA-DRAP01903 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HLA-DRAP01903 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HLA-DRAP01903 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HLA-DRAP01903 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HLA-DRAP01903 KRT19P1-201ENST00000405746 1186 ntBASIC22.64■■□□□ 1.21
HLA-DRAP01903 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.64■■□□□ 1.21
HLA-DRAP01903 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.64■■□□□ 1.21
HLA-DRAP01903 AC008175.2-201ENST00000612840 297 ntBASIC22.64■■□□□ 1.21
HLA-DRAP01903 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.21
HLA-DRAP01903 CLDN5-201ENST00000403084 2357 ntBASIC22.64■■□□□ 1.21
HLA-DRAP01903 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HLA-DRAP01903 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
HLA-DRAP01903 FEM1AP4-201ENST00000443167 1987 ntBASIC22.63■■□□□ 1.21
HLA-DRAP01903 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DRAP01903 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DRAP01903 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DRAP01903 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.63■■□□□ 1.21
HLA-DRAP01903 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.63■■□□□ 1.21
HLA-DRAP01903 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DRAP01903 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DRAP01903 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.63■■□□□ 1.21
HLA-DRAP01903 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.63■■□□□ 1.21
HLA-DRAP01903 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
HLA-DRAP01903 AL024507.2-201ENST00000606070 2574 ntBASIC22.63■■□□□ 1.21
HLA-DRAP01903 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DRAP01903 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DRAP01903 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.63■■□□□ 1.21
HLA-DRAP01903 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HLA-DRAP01903 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
HLA-DRAP01903 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DRAP01903 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
HLA-DRAP01903 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DRAP01903 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.62■■□□□ 1.21
HLA-DRAP01903 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
HLA-DRAP01903 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DRAP01903 POU5F1P4-201ENST00000413175 1085 ntBASIC22.62■■□□□ 1.21
HLA-DRAP01903 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.62■■□□□ 1.21
HLA-DRAP01903 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DRAP01903 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.62■■□□□ 1.21
HLA-DRAP01903 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DRAP01903 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DRAP01903 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DRAP01903 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
HLA-DRAP01903 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HLA-DRAP01903 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
HLA-DRAP01903 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.61■■□□□ 1.21
HLA-DRAP01903 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.61■■□□□ 1.21
HLA-DRAP01903 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
HLA-DRAP01903 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.61■■□□□ 1.21
HLA-DRAP01903 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
HLA-DRAP01903 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DRAP01903 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HLA-DRAP01903 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DRAP01903 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DRAP01903 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DRAP01903 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.6■■□□□ 1.21
HLA-DRAP01903 SLC7A5P2-201ENST00000553010 536 ntBASIC22.6■■□□□ 1.21
HLA-DRAP01903 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DRAP01903 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DRAP01903 AF106564.1-201ENST00000607058 2553 ntBASIC22.6■■□□□ 1.21
HLA-DRAP01903 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms