Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
NPHS1O60500 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.5■□□□□ 0.87
NPHS1O60500 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.5■□□□□ 0.87
NPHS1O60500 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.5■□□□□ 0.87
NPHS1O60500 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.5■□□□□ 0.87
NPHS1O60500 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
NPHS1O60500 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
NPHS1O60500 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NPHS1O60500 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPHS1O60500 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.49■□□□□ 0.87
NPHS1O60500 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPHS1O60500 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
NPHS1O60500 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.49■□□□□ 0.87
NPHS1O60500 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NPHS1O60500 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.49■□□□□ 0.87
NPHS1O60500 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPHS1O60500 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.49■□□□□ 0.87
NPHS1O60500 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.49■□□□□ 0.87
NPHS1O60500 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.49■□□□□ 0.87
NPHS1O60500 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPHS1O60500 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPHS1O60500 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPHS1O60500 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NPHS1O60500 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPHS1O60500 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.49■□□□□ 0.87
NPHS1O60500 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.48■□□□□ 0.87
NPHS1O60500 BX842568.3-201ENST00000418104 571 ntBASIC20.48■□□□□ 0.87
NPHS1O60500 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.48■□□□□ 0.87
NPHS1O60500 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.48■□□□□ 0.87
NPHS1O60500 AC131281.2-201ENST00000520478 145 ntBASIC20.48■□□□□ 0.87
NPHS1O60500 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPHS1O60500 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NPHS1O60500 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.47■□□□□ 0.87
NPHS1O60500 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NPHS1O60500 AC092667.1-201ENST00000434301 2586 ntBASIC20.47■□□□□ 0.87
NPHS1O60500 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.47■□□□□ 0.87
NPHS1O60500 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPHS1O60500 AC121338.2-201ENST00000622535 1744 ntBASIC20.47■□□□□ 0.87
NPHS1O60500 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 AC073314.1-201ENST00000568729 2216 ntBASIC20.46■□□□□ 0.87
NPHS1O60500 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 AC009237.3-201ENST00000393279 1427 ntBASIC20.46■□□□□ 0.87
NPHS1O60500 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.46■□□□□ 0.87
NPHS1O60500 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NPHS1O60500 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NPHS1O60500 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NPHS1O60500 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.46■□□□□ 0.87
NPHS1O60500 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.46■□□□□ 0.87
NPHS1O60500 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NPHS1O60500 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
NPHS1O60500 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPHS1O60500 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
NPHS1O60500 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NPHS1O60500 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NPHS1O60500 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NPHS1O60500 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPHS1O60500 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms