Protein–RNA interactions for Protein: B4DU55

ZNF879, Zinc finger protein 879, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF879B4DU55 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF879B4DU55 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.63■□□□□ 0.57
ZNF879B4DU55 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF879B4DU55 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF879B4DU55 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF879B4DU55 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF879B4DU55 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF879B4DU55 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF879B4DU55 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF879B4DU55 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF879B4DU55 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF879B4DU55 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
ZNF879B4DU55 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF879B4DU55 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF879B4DU55 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF879B4DU55 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF879B4DU55 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF879B4DU55 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF879B4DU55 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF879B4DU55 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ZNF879B4DU55 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF879B4DU55 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF879B4DU55 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ZNF879B4DU55 AC092171.4-201ENST00000609130 632 ntBASIC18.61■□□□□ 0.57
ZNF879B4DU55 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF879B4DU55 AC068587.7-201ENST00000641602 218 ntBASIC18.61■□□□□ 0.57
ZNF879B4DU55 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF879B4DU55 FEM1AP1-201ENST00000431297 1995 ntBASIC18.61■□□□□ 0.57
ZNF879B4DU55 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF879B4DU55 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 AL049796.1-201ENST00000565336 1766 ntBASIC18.6■□□□□ 0.57
ZNF879B4DU55 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZNF879B4DU55 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF879B4DU55 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZNF879B4DU55 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 AC110285.6-201ENST00000617652 491 ntBASIC18.6■□□□□ 0.57
ZNF879B4DU55 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF879B4DU55 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZNF879B4DU55 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF879B4DU55 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF879B4DU55 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF879B4DU55 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 DUX4L19-201ENST00000557448 1267 ntBASIC18.59■□□□□ 0.57
ZNF879B4DU55 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 pRNA.6-201ENST00000610482 90 ntBASIC18.59■□□□□ 0.57
ZNF879B4DU55 pRNA.5-201ENST00000612139 90 ntBASIC18.59■□□□□ 0.57
ZNF879B4DU55 pRNA.11-201ENST00000618423 90 ntBASIC18.59■□□□□ 0.57
ZNF879B4DU55 pRNA.13-201ENST00000619112 90 ntBASIC18.59■□□□□ 0.57
ZNF879B4DU55 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF879B4DU55 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF879B4DU55 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ZNF879B4DU55 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF879B4DU55 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF879B4DU55 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ZNF879B4DU55 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF879B4DU55 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
ZNF879B4DU55 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms