Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
A0A1W2PRF3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
A0A1W2PRF3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.26■□□□□ 0.35
A0A1W2PRF3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.26■□□□□ 0.35
A0A1W2PRF3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 AC006015.1-201ENST00000429970 570 ntBASIC17.25■□□□□ 0.35
A0A1W2PRF3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 BID-214ENST00000617586 542 ntTSL 5 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
A0A1W2PRF3 AL117328.2-201ENST00000624617 1940 ntBASIC17.25■□□□□ 0.35
A0A1W2PRF3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
A0A1W2PRF3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.24■□□□□ 0.35
A0A1W2PRF3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
A0A1W2PRF3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
A0A1W2PRF3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.24■□□□□ 0.35
A0A1W2PRF3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.24■□□□□ 0.35
A0A1W2PRF3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
A0A1W2PRF3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
A0A1W2PRF3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
A0A1W2PRF3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 AC079834.2-201ENST00000609776 1949 ntBASIC17.23■□□□□ 0.35
A0A1W2PRF3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
A0A1W2PRF3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
A0A1W2PRF3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
A0A1W2PRF3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.22■□□□□ 0.35
A0A1W2PRF3 ECEL1P1-201ENST00000373592 1742 ntBASIC17.22■□□□□ 0.35
A0A1W2PRF3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.22■□□□□ 0.35
A0A1W2PRF3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
A0A1W2PRF3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
A0A1W2PRF3 AC010141.2-201ENST00000452426 721 ntBASIC17.22■□□□□ 0.35
A0A1W2PRF3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.22■□□□□ 0.35
A0A1W2PRF3 SLC7A5P2-201ENST00000553010 536 ntBASIC17.22■□□□□ 0.35
A0A1W2PRF3 EEF1DP3-203ENST00000566025 782 ntBASIC17.22■□□□□ 0.35
A0A1W2PRF3 AC138907.5-202ENST00000569484 235 ntBASIC17.22■□□□□ 0.35
A0A1W2PRF3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.22■□□□□ 0.35
A0A1W2PRF3 AC053503.5-201ENST00000601508 636 ntBASIC17.22■□□□□ 0.35
A0A1W2PRF3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.22■□□□□ 0.35
A0A1W2PRF3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
A0A1W2PRF3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
A0A1W2PRF3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
A0A1W2PRF3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.22■□□□□ 0.35
A0A1W2PRF3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
A0A1W2PRF3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
A0A1W2PRF3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
A0A1W2PRF3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
A0A1W2PRF3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
A0A1W2PRF3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms