Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 AC011298.3-201ENST00000615796 283 ntBASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 C11orf96-202ENST00000528572 1834 ntBASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-4A0A0B4J246 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-4A0A0B4J246 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV8-4A0A0B4J246 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV8-4A0A0B4J246 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV8-4A0A0B4J246 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV8-4A0A0B4J246 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 AC131281.2-201ENST00000520478 145 ntBASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 AC079089.2-201ENST00000531211 1277 ntBASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 AC136469.2-201ENST00000623944 1028 ntBASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV8-4A0A0B4J246 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV8-4A0A0B4J246 AC010141.3-201ENST00000456659 717 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms