Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 AC006455.2-201ENST00000429931 906 ntBASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-1A0A0B4J241 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-1A0A0B4J241 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 LINC01521-201ENST00000504184 1943 ntBASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 AC068587.7-201ENST00000641602 218 ntBASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-1A0A0B4J241 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV13-1A0A0B4J241 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 RARRES2P1-201ENST00000474487 481 ntBASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 AC009299.2-201ENST00000482477 511 ntBASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 AC099791.2-201ENST00000605725 427 ntBASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-1A0A0B4J241 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 OXCT2P1-201ENST00000447263 1535 ntBASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms