Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.82■■□□□ 1.08
TRAV19A0A0A6YYK7 AC098934.4-201ENST00000564127 592 ntBASIC21.82■■□□□ 1.08
TRAV19A0A0A6YYK7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.82■■□□□ 1.08
TRAV19A0A0A6YYK7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.82■■□□□ 1.08
TRAV19A0A0A6YYK7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV19A0A0A6YYK7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.82■■□□□ 1.08
TRAV19A0A0A6YYK7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV19A0A0A6YYK7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV19A0A0A6YYK7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV19A0A0A6YYK7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
TRAV19A0A0A6YYK7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV19A0A0A6YYK7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 AC245052.3-201ENST00000450182 901 ntBASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 RARRES2P4-201ENST00000514074 484 ntBASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV19A0A0A6YYK7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.77■■□□□ 1.08
TRAV19A0A0A6YYK7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.77■■□□□ 1.08
TRAV19A0A0A6YYK7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV19A0A0A6YYK7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV19A0A0A6YYK7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TRAV19A0A0A6YYK7 BX276092.2-201ENST00000417668 665 ntBASIC21.77■■□□□ 1.08
TRAV19A0A0A6YYK7 AC092118.2-201ENST00000613495 667 ntBASIC21.77■■□□□ 1.08
TRAV19A0A0A6YYK7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.77■■□□□ 1.08
TRAV19A0A0A6YYK7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRAV19A0A0A6YYK7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.77■■□□□ 1.07
TRAV19A0A0A6YYK7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 C11orf96-202ENST00000528572 1834 ntBASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TRAV19A0A0A6YYK7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms