Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT52Q9Y366 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IFT52Q9Y366 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.67■□□□□ 0.74
IFT52Q9Y366 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
IFT52Q9Y366 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT52Q9Y366 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IFT52Q9Y366 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.67■□□□□ 0.74
IFT52Q9Y366 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.67■□□□□ 0.74
IFT52Q9Y366 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IFT52Q9Y366 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT52Q9Y366 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IFT52Q9Y366 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IFT52Q9Y366 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
IFT52Q9Y366 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.66■□□□□ 0.74
IFT52Q9Y366 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 AC003102.1-202ENST00000563394 1796 ntBASIC19.66■□□□□ 0.74
IFT52Q9Y366 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.66■□□□□ 0.74
IFT52Q9Y366 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.66■□□□□ 0.74
IFT52Q9Y366 SMUG1P1-201ENST00000590640 811 ntBASIC19.66■□□□□ 0.74
IFT52Q9Y366 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
IFT52Q9Y366 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
IFT52Q9Y366 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 IGHV3-19-201ENST00000521488 291 ntBASIC19.65■□□□□ 0.74
IFT52Q9Y366 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 AP006587.3-201ENST00000525742 1516 ntBASIC19.65■□□□□ 0.74
IFT52Q9Y366 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.65■□□□□ 0.74
IFT52Q9Y366 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT52Q9Y366 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
IFT52Q9Y366 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFT52Q9Y366 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.64■□□□□ 0.73
IFT52Q9Y366 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.64■□□□□ 0.73
IFT52Q9Y366 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.64■□□□□ 0.73
IFT52Q9Y366 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFT52Q9Y366 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.64■□□□□ 0.73
IFT52Q9Y366 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT52Q9Y366 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT52Q9Y366 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT52Q9Y366 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.64■□□□□ 0.73
IFT52Q9Y366 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 FEM1AP4-201ENST00000443167 1987 ntBASIC19.63■□□□□ 0.73
IFT52Q9Y366 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
IFT52Q9Y366 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
IFT52Q9Y366 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT52Q9Y366 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.63■□□□□ 0.73
IFT52Q9Y366 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.63■□□□□ 0.73
IFT52Q9Y366 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.63■□□□□ 0.73
IFT52Q9Y366 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.63■□□□□ 0.73
IFT52Q9Y366 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT52Q9Y366 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT52Q9Y366 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFT52Q9Y366 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFT52Q9Y366 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFT52Q9Y366 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFT52Q9Y366 PBX2P1-201ENST00000493219 1291 ntBASIC19.62■□□□□ 0.73
IFT52Q9Y366 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 AC027682.1-201ENST00000562846 899 ntBASIC19.62■□□□□ 0.73
IFT52Q9Y366 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 AC008764.7-201ENST00000593779 1081 ntBASIC19.62■□□□□ 0.73
IFT52Q9Y366 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms