Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM4Q9UKN5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM4Q9UKN5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM4Q9UKN5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM4Q9UKN5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 HSD17B1P1-201ENST00000590052 955 ntBASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 AC133552.2-201ENST00000619106 1032 ntBASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM4Q9UKN5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM4Q9UKN5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM4Q9UKN5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM4Q9UKN5 AC073314.1-201ENST00000568729 2216 ntBASIC21.71■■□□□ 1.07
PRDM4Q9UKN5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PRDM4Q9UKN5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PRDM4Q9UKN5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM4Q9UKN5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms