Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.94■□□□□ 0.94
SPASTQ9UBP0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPASTQ9UBP0 AP006587.3-201ENST00000525742 1516 ntBASIC20.94■□□□□ 0.94
SPASTQ9UBP0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SPASTQ9UBP0 AL355802.2-201ENST00000402069 882 ntBASIC20.93■□□□□ 0.94
SPASTQ9UBP0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.93■□□□□ 0.94
SPASTQ9UBP0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPASTQ9UBP0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.93■□□□□ 0.94
SPASTQ9UBP0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPASTQ9UBP0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.93■□□□□ 0.94
SPASTQ9UBP0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 ECEL1P1-201ENST00000373592 1742 ntBASIC20.92■□□□□ 0.94
SPASTQ9UBP0 AC127496.7-201ENST00000625110 1798 ntBASIC20.92■□□□□ 0.94
SPASTQ9UBP0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 AC242852.2-201ENST00000615738 1807 ntBASIC20.92■□□□□ 0.94
SPASTQ9UBP0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 AL121832.2-201ENST00000610979 668 ntBASIC20.92■□□□□ 0.94
SPASTQ9UBP0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPASTQ9UBP0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 EEF1DP3-203ENST00000566025 782 ntBASIC20.91■□□□□ 0.94
SPASTQ9UBP0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 AC005181.1-201ENST00000604782 1256 ntBASIC20.91■□□□□ 0.94
SPASTQ9UBP0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.91■□□□□ 0.94
SPASTQ9UBP0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 AC053503.5-201ENST00000601508 636 ntBASIC20.9■□□□□ 0.94
SPASTQ9UBP0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 AC137767.1-201ENST00000602918 1920 ntBASIC20.9■□□□□ 0.94
SPASTQ9UBP0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPASTQ9UBP0 AC087742.1-201ENST00000575880 1738 ntBASIC20.9■□□□□ 0.94
SPASTQ9UBP0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPASTQ9UBP0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.89■□□□□ 0.94
SPASTQ9UBP0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPASTQ9UBP0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
SPASTQ9UBP0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SPASTQ9UBP0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SPASTQ9UBP0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 AC083906.2-201ENST00000511578 360 ntBASIC20.88■□□□□ 0.93
SPASTQ9UBP0 AL050303.2-201ENST00000619798 666 ntBASIC20.88■□□□□ 0.93
SPASTQ9UBP0 AC010536.3-201ENST00000620306 533 ntBASIC20.88■□□□□ 0.93
SPASTQ9UBP0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SPASTQ9UBP0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms