Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPSF2Q9P2I0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPSF2Q9P2I0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 AC010141.3-201ENST00000456659 717 ntBASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 AC104564.3-201ENST00000582367 638 ntBASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 MIR4466-201ENST00000606121 54 ntBASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.11■□□□□ 0.97
CPSF2Q9P2I0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 SYT6-210ENST00000641643 1587 ntBASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 SERBP1P1-201ENST00000396021 1160 ntBASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CPSF2Q9P2I0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPSF2Q9P2I0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms