Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PIF1Q9H611 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.05■□□□□ 0.8
PIF1Q9H611 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PIF1Q9H611 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PIF1Q9H611 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PIF1Q9H611 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.05■□□□□ 0.8
PIF1Q9H611 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PIF1Q9H611 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PIF1Q9H611 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PIF1Q9H611 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PIF1Q9H611 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PIF1Q9H611 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
PIF1Q9H611 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PIF1Q9H611 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.04■□□□□ 0.8
PIF1Q9H611 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PIF1Q9H611 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PIF1Q9H611 AL049796.1-201ENST00000565336 1766 ntBASIC20.04■□□□□ 0.8
PIF1Q9H611 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PIF1Q9H611 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.04■□□□□ 0.8
PIF1Q9H611 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PIF1Q9H611 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PIF1Q9H611 FEM1AP1-201ENST00000431297 1995 ntBASIC20.04■□□□□ 0.8
PIF1Q9H611 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PIF1Q9H611 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PIF1Q9H611 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PIF1Q9H611 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PIF1Q9H611 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PIF1Q9H611 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 AC003102.1-202ENST00000563394 1796 ntBASIC20.03■□□□□ 0.8
PIF1Q9H611 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PIF1Q9H611 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.03■□□□□ 0.8
PIF1Q9H611 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 AC010141.3-201ENST00000456659 717 ntBASIC20.03■□□□□ 0.8
PIF1Q9H611 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.03■□□□□ 0.8
PIF1Q9H611 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.03■□□□□ 0.8
PIF1Q9H611 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.03■□□□□ 0.8
PIF1Q9H611 AC087239.1-201ENST00000622671 572 ntBASIC20.03■□□□□ 0.8
PIF1Q9H611 PCDHAC2-203ENST00000615316 3011 ntBASIC20.03■□□□□ 0.8
PIF1Q9H611 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.03■□□□□ 0.8
PIF1Q9H611 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PIF1Q9H611 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PIF1Q9H611 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.02■□□□□ 0.8
PIF1Q9H611 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.02■□□□□ 0.8
PIF1Q9H611 AC068587.7-201ENST00000641602 218 ntBASIC20.02■□□□□ 0.8
PIF1Q9H611 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PIF1Q9H611 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PIF1Q9H611 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PIF1Q9H611 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.02■□□□□ 0.79
PIF1Q9H611 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
PIF1Q9H611 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.01■□□□□ 0.79
PIF1Q9H611 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.01■□□□□ 0.79
PIF1Q9H611 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PIF1Q9H611 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.01■□□□□ 0.79
PIF1Q9H611 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.01■□□□□ 0.79
PIF1Q9H611 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.01■□□□□ 0.79
PIF1Q9H611 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.01■□□□□ 0.79
PIF1Q9H611 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 OXCT2P1-201ENST00000447263 1535 ntBASIC20.01■□□□□ 0.79
PIF1Q9H611 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.01■□□□□ 0.79
PIF1Q9H611 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PIF1Q9H611 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.01■□□□□ 0.79
PIF1Q9H611 AL391422.3-201ENST00000603791 2761 ntBASIC20■□□□□ 0.79
PIF1Q9H611 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 OR2I1P-207ENST00000453522 948 ntBASIC20■□□□□ 0.79
PIF1Q9H611 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PIF1Q9H611 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20■□□□□ 0.79
PIF1Q9H611 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms