Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA4Q9BXL8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 AC068587.7-201ENST00000641602 218 ntBASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.9■□□□□ 0.62
CDCA4Q9BXL8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDCA4Q9BXL8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.89■□□□□ 0.62
CDCA4Q9BXL8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDCA4Q9BXL8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.89■□□□□ 0.62
CDCA4Q9BXL8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.89■□□□□ 0.62
CDCA4Q9BXL8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDCA4Q9BXL8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CDCA4Q9BXL8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 AC027702.1-201ENST00000563810 1770 ntBASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 BX664725.1-201ENST00000438252 379 ntBASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA4Q9BXL8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 AL034346.1-201ENST00000568244 1277 ntBASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA4Q9BXL8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 AC020907.5-201ENST00000624372 1936 ntBASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 KRT125P-201ENST00000546827 989 ntBASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDCA4Q9BXL8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms