Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PKP2Q99959 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP2Q99959 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP2Q99959 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.81■□□□□ 0.76
PKP2Q99959 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP2Q99959 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP2Q99959 MIR6722-201ENST00000617286 78 ntBASIC19.81■□□□□ 0.76
PKP2Q99959 AL031602.1-201ENST00000633169 911 ntBASIC19.81■□□□□ 0.76
PKP2Q99959 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.81■□□□□ 0.76
PKP2Q99959 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP2Q99959 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 AC112907.3-201ENST00000577781 2400 ntBASIC19.81■□□□□ 0.76
PKP2Q99959 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP2Q99959 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PKP2Q99959 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.8■□□□□ 0.76
PKP2Q99959 AC009102.2-201ENST00000606772 1639 ntBASIC19.8■□□□□ 0.76
PKP2Q99959 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
PKP2Q99959 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PKP2Q99959 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PKP2Q99959 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.8■□□□□ 0.76
PKP2Q99959 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PKP2Q99959 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PKP2Q99959 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP2Q99959 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
PKP2Q99959 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PKP2Q99959 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PKP2Q99959 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PKP2Q99959 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PKP2Q99959 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP2Q99959 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
PKP2Q99959 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.79■□□□□ 0.76
PKP2Q99959 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PKP2Q99959 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP2Q99959 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP2Q99959 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP2Q99959 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.79■□□□□ 0.76
PKP2Q99959 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.79■□□□□ 0.76
PKP2Q99959 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP2Q99959 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PKP2Q99959 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP2Q99959 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.78■□□□□ 0.76
PKP2Q99959 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.78■□□□□ 0.76
PKP2Q99959 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.78■□□□□ 0.76
PKP2Q99959 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.78■□□□□ 0.76
PKP2Q99959 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PKP2Q99959 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP2Q99959 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PKP2Q99959 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP2Q99959 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
PKP2Q99959 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.77■□□□□ 0.76
PKP2Q99959 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PKP2Q99959 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PKP2Q99959 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP2Q99959 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP2Q99959 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.77■□□□□ 0.76
PKP2Q99959 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP2Q99959 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PKP2Q99959 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP2Q99959 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PKP2Q99959 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PKP2Q99959 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PKP2Q99959 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP2Q99959 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms