Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 MIR4508-201ENST00000584178 70 ntBASIC21.56■■□□□ 1.04
ZIM3Q96PE6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 AL020996.1-203ENST00000536896 2307 ntBASIC21.56■■□□□ 1.04
ZIM3Q96PE6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ZIM3Q96PE6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 AC112907.3-201ENST00000577781 2400 ntBASIC21.55■■□□□ 1.04
ZIM3Q96PE6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.55■■□□□ 1.04
ZIM3Q96PE6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZIM3Q96PE6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 TSPY13P-201ENST00000338964 914 ntBASIC21.53■■□□□ 1.04
ZIM3Q96PE6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 AC003102.1-202ENST00000563394 1796 ntBASIC21.53■■□□□ 1.04
ZIM3Q96PE6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZIM3Q96PE6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZIM3Q96PE6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 AC020907.5-201ENST00000624372 1936 ntBASIC21.51■■□□□ 1.03
ZIM3Q96PE6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZIM3Q96PE6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ZIM3Q96PE6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms