Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.18■□□□□ 0.98
CHMP6Q96FZ7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 AL020996.1-203ENST00000536896 2307 ntBASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP6Q96FZ7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 AC137630.3-201ENST00000607245 391 ntBASIC21.16■□□□□ 0.98
CHMP6Q96FZ7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 AC006128.1-201ENST00000624704 1661 ntBASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 SNX5-217ENST00000606557 1087 ntBASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP6Q96FZ7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP6Q96FZ7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP6Q96FZ7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP6Q96FZ7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP6Q96FZ7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP6Q96FZ7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP6Q96FZ7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 KRT125P-201ENST00000546827 989 ntBASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHMP6Q96FZ7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP6Q96FZ7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms