Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 DUX4L19-201ENST00000557448 1267 ntBASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SLC47A1Q96FL8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 AC068587.7-201ENST00000641602 218 ntBASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC47A1Q96FL8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 OR2I1P-207ENST00000453522 948 ntBASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 MIR4466-201ENST00000606121 54 ntBASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SLC47A1Q96FL8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 SYT6-210ENST00000641643 1587 ntBASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 AL138724.1-201ENST00000606771 1088 ntBASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC47A1Q96FL8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC47A1Q96FL8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC47A1Q96FL8 AC087239.1-201ENST00000622671 572 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms