Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX1Q92499 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.51■■□□□ 1.19
DDX1Q92499 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX1Q92499 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.51■■□□□ 1.19
DDX1Q92499 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX1Q92499 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX1Q92499 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
DDX1Q92499 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.5■■□□□ 1.19
DDX1Q92499 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.5■■□□□ 1.19
DDX1Q92499 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.5■■□□□ 1.19
DDX1Q92499 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
DDX1Q92499 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX1Q92499 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX1Q92499 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.5■■□□□ 1.19
DDX1Q92499 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX1Q92499 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX1Q92499 AC123595.1-201ENST00000440769 1046 ntBASIC22.49■■□□□ 1.19
DDX1Q92499 DUX4L2-201ENST00000561772 1275 ntBASIC22.49■■□□□ 1.19
DDX1Q92499 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.49■■□□□ 1.19
DDX1Q92499 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
DDX1Q92499 DUX4L6-201ENST00000626483 1275 ntBASIC22.49■■□□□ 1.19
DDX1Q92499 DUX4L1-201ENST00000627662 1275 ntBASIC22.49■■□□□ 1.19
DDX1Q92499 DUX4L8-201ENST00000629013 1275 ntBASIC22.49■■□□□ 1.19
DDX1Q92499 DUX4L3-201ENST00000630187 1275 ntBASIC22.49■■□□□ 1.19
DDX1Q92499 DUX4L7-201ENST00000630678 1275 ntBASIC22.49■■□□□ 1.19
DDX1Q92499 DUX4L5-201ENST00000630834 1275 ntBASIC22.49■■□□□ 1.19
DDX1Q92499 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.49■■□□□ 1.19
DDX1Q92499 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.49■■□□□ 1.19
DDX1Q92499 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX1Q92499 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
DDX1Q92499 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX1Q92499 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX1Q92499 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX1Q92499 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
DDX1Q92499 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
DDX1Q92499 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX1Q92499 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX1Q92499 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX1Q92499 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX1Q92499 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.48■■□□□ 1.19
DDX1Q92499 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX1Q92499 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX1Q92499 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX1Q92499 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
DDX1Q92499 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.47■■□□□ 1.19
DDX1Q92499 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 AC027612.3-201ENST00000413684 1047 ntBASIC22.47■■□□□ 1.19
DDX1Q92499 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.47■■□□□ 1.19
DDX1Q92499 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX1Q92499 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX1Q92499 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX1Q92499 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX1Q92499 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX1Q92499 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
DDX1Q92499 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX1Q92499 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX1Q92499 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
DDX1Q92499 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX1Q92499 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
DDX1Q92499 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX1Q92499 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.46■■□□□ 1.19
DDX1Q92499 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
DDX1Q92499 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX1Q92499 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX1Q92499 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX1Q92499 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX1Q92499 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX1Q92499 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
DDX1Q92499 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX1Q92499 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms