Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIML2Q8N7C3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIML2Q8N7C3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIML2Q8N7C3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
TRIML2Q8N7C3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIML2Q8N7C3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
TRIML2Q8N7C3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIML2Q8N7C3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 AC104564.3-201ENST00000582367 638 ntBASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIML2Q8N7C3 SYT6-210ENST00000641643 1587 ntBASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIML2Q8N7C3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 AL356441.2-201ENST00000443009 864 ntBASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIML2Q8N7C3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 AL034346.1-201ENST00000568244 1277 ntBASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIML2Q8N7C3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIML2Q8N7C3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIML2Q8N7C3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms