Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDKL3Q8IVW4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 AC012414.1-201ENST00000556676 535 ntBASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 AL049796.1-201ENST00000565336 1766 ntBASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.65■■□□□ 1.06
CDKL3Q8IVW4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKL3Q8IVW4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.64■■□□□ 1.06
CDKL3Q8IVW4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CDKL3Q8IVW4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CDKL3Q8IVW4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.64■■□□□ 1.06
CDKL3Q8IVW4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.64■■□□□ 1.06
CDKL3Q8IVW4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CDKL3Q8IVW4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL3Q8IVW4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL3Q8IVW4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.64■■□□□ 1.05
CDKL3Q8IVW4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.64■■□□□ 1.05
CDKL3Q8IVW4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.64■■□□□ 1.05
CDKL3Q8IVW4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL3Q8IVW4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 AC142381.2-201ENST00000566120 298 ntBASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 AL354811.1-201ENST00000610286 706 ntBASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.63■■□□□ 1.05
CDKL3Q8IVW4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL3Q8IVW4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL3Q8IVW4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL3Q8IVW4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.62■■□□□ 1.05
CDKL3Q8IVW4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL3Q8IVW4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.62■■□□□ 1.05
CDKL3Q8IVW4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.61■■□□□ 1.05
CDKL3Q8IVW4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL3Q8IVW4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 AL358852.1-201ENST00000623174 1268 ntBASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDKL3Q8IVW4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDKL3Q8IVW4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.58■■□□□ 1.05
CDKL3Q8IVW4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDKL3Q8IVW4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms