Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK2Q86Y07 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK2Q86Y07 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK2Q86Y07 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.49■□□□□ 0.71
VRK2Q86Y07 AC005224.4-201ENST00000583262 1652 ntBASIC19.49■□□□□ 0.71
VRK2Q86Y07 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
VRK2Q86Y07 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK2Q86Y07 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 BX005040.4-201ENST00000637145 1518 ntBASIC19.48■□□□□ 0.71
VRK2Q86Y07 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK2Q86Y07 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 SUDS3P1-201ENST00000505831 966 ntBASIC19.48■□□□□ 0.71
VRK2Q86Y07 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 AL139246.5-201ENST00000606645 996 ntBASIC19.48■□□□□ 0.71
VRK2Q86Y07 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK2Q86Y07 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK2Q86Y07 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK2Q86Y07 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK2Q86Y07 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK2Q86Y07 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.48■□□□□ 0.71
VRK2Q86Y07 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 AL049796.1-201ENST00000565336 1766 ntBASIC19.47■□□□□ 0.71
VRK2Q86Y07 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK2Q86Y07 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK2Q86Y07 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VRK2Q86Y07 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK2Q86Y07 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VRK2Q86Y07 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VRK2Q86Y07 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK2Q86Y07 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK2Q86Y07 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VRK2Q86Y07 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK2Q86Y07 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK2Q86Y07 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK2Q86Y07 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.46■□□□□ 0.71
VRK2Q86Y07 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VRK2Q86Y07 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK2Q86Y07 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.46■□□□□ 0.71
VRK2Q86Y07 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK2Q86Y07 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.46■□□□□ 0.71
VRK2Q86Y07 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.46■□□□□ 0.71
VRK2Q86Y07 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK2Q86Y07 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VRK2Q86Y07 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK2Q86Y07 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK2Q86Y07 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.45■□□□□ 0.7
VRK2Q86Y07 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.45■□□□□ 0.7
VRK2Q86Y07 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.45■□□□□ 0.7
VRK2Q86Y07 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VRK2Q86Y07 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.45■□□□□ 0.7
VRK2Q86Y07 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.45■□□□□ 0.7
VRK2Q86Y07 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.45■□□□□ 0.7
VRK2Q86Y07 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK2Q86Y07 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK2Q86Y07 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.45■□□□□ 0.7
VRK2Q86Y07 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK2Q86Y07 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.44■□□□□ 0.7
VRK2Q86Y07 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.44■□□□□ 0.7
VRK2Q86Y07 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.44■□□□□ 0.7
VRK2Q86Y07 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.44■□□□□ 0.7
VRK2Q86Y07 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.44■□□□□ 0.7
VRK2Q86Y07 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
VRK2Q86Y07 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.44■□□□□ 0.7
VRK2Q86Y07 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK2Q86Y07 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VRK2Q86Y07 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.43■□□□□ 0.7
VRK2Q86Y07 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VRK2Q86Y07 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
VRK2Q86Y07 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
VRK2Q86Y07 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms