Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 GNS-209ENST00000545273 906 ntTSL 56.68□□□□□ -1.345e-7■■■□□ 19.1
SND1Q7KZF4 NPC1-208ENST00000590301 410 ntTSL 27.84□□□□□ -1.152e-6■■■□□ 19.1
SND1Q7KZF4 OAT-204ENST00000476917 646 ntTSL 34.77□□□□□ -1.653e-7■■■□□ 19.1
SND1Q7KZF4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.631e-7■■■□□ 19.1
SND1Q7KZF4 GLT8D1-209ENST00000481643 796 ntTSL 38.66□□□□□ -1.023e-6■■■□□ 19.1
SND1Q7KZF4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.15■□□□□ 0.52e-7■■■□□ 19.1
SND1Q7KZF4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.492e-7■■■□□ 19.1
SND1Q7KZF4 ILVBL-206ENST00000533086 4248 ntTSL 211.98□□□□□ -0.492e-7■■■□□ 19.1
SND1Q7KZF4 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.187e-9■■■□□ 19.1
SND1Q7KZF4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.283e-7■■■□□ 19
SND1Q7KZF4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.24■■□□□ 1.153e-7■■■□□ 19
SND1Q7KZF4 SYNGR2-204ENST00000589168 2125 ntTSL 220.33■□□□□ 0.843e-7■■■□□ 19
SND1Q7KZF4 SYNGR2-205ENST00000589183 796 ntTSL 319■□□□□ 0.633e-7■■■□□ 19
SND1Q7KZF4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.5■□□□□ 0.553e-7■■■□□ 19
SND1Q7KZF4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.533e-7■■■□□ 19
SND1Q7KZF4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.53■□□□□ 0.243e-7■■■□□ 19
SND1Q7KZF4 SYNGR2-209ENST00000592456 3036 nt13.61□□□□□ -0.233e-7■■■□□ 19
SND1Q7KZF4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.72■■■□□ 2.034e-7■■■□□ 19
SND1Q7KZF4 GUSB-205ENST00000447929 1983 ntTSL 326.81■■□□□ 1.884e-7■■■□□ 19
SND1Q7KZF4 GUSB-203ENST00000430730 1859 ntTSL 525.53■■□□□ 1.684e-7■■■□□ 19
SND1Q7KZF4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.394e-7■■■□□ 19
SND1Q7KZF4 TFRC-210ENST00000465288 560 ntTSL 59.02□□□□□ -0.976e-12■■■□□ 19
SND1Q7KZF4 EMC1-212ENST00000494770 779 ntTSL 512.63□□□□□ -0.392e-7■■■□□ 19
SND1Q7KZF4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.392e-13■■■□□ 19
SND1Q7KZF4 TNFRSF10B-207ENST00000523504 1464 ntTSL 222.44■■□□□ 1.182e-13■■■□□ 19
SND1Q7KZF4 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.332e-13■■■□□ 19
SND1Q7KZF4 APLP2-213ENST00000529701 573 ntTSL 521.54■■□□□ 1.046e-11■■■□□ 19
SND1Q7KZF4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.32■□□□□ 0.362e-17■■■□□ 19
SND1Q7KZF4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.43■□□□□ 0.862e-9■■■□□ 19
SND1Q7KZF4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.4■□□□□ 0.542e-9■■■□□ 19
SND1Q7KZF4 SERPINF1-204ENST00000571149 431 ntTSL 317.31■□□□□ 0.364e-87■■■□□ 19
SND1Q7KZF4 CD82-204ENST00000524750 757 ntTSL 217.02■□□□□ 0.322e-9■■■□□ 19
SND1Q7KZF4 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.212e-9■■■□□ 19
SND1Q7KZF4 SUMF2-216ENST00000483327 1195 ntTSL 213.59□□□□□ -0.232e-9■■■□□ 19
SND1Q7KZF4 CD46-211ENST00000464082 567 ntTSL 26.08□□□□□ -1.443e-12■■■□□ 19
SND1Q7KZF4 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC10.75□□□□□ -0.691e-7■■■□□ 19
SND1Q7KZF4 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC9.6□□□□□ -0.871e-7■■■□□ 19
SND1Q7KZF4 MARCH6-210ENST00000511802 4734 ntTSL 28.59□□□□□ -1.031e-7■■■□□ 19
SND1Q7KZF4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.211e-7■■■□□ 19
SND1Q7KZF4 TMEM87A-205ENST00000562946 1430 ntTSL 29.05□□□□□ -0.962e-6■■■□□ 19
SND1Q7KZF4 SURF4-204ENST00000465565 400 ntTSL 320.63■□□□□ 0.892e-10■■■□□ 19
SND1Q7KZF4 HYOU1-204ENST00000527738 809 ntTSL 28.17□□□□□ -1.14e-8■■■□□ 19
SND1Q7KZF4 PDIA4-202ENST00000413966 550 ntTSL 218.86■□□□□ 0.616e-15■■■□□ 19
SND1Q7KZF4 SDF2-204ENST00000587338 583 ntTSL 38.87□□□□□ -0.995e-8■■■□□ 18.9
SND1Q7KZF4 TM4SF1-203ENST00000493298 702 ntTSL 49.26□□□□□ -0.931e-22■■■□□ 18.9
SND1Q7KZF4 AGRN-206ENST00000477585 707 ntTSL 325.14■■□□□ 1.624e-12■■■□□ 18.9
SND1Q7KZF4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.895e-7■■■□□ 18.9
SND1Q7KZF4 P3H1-207ENST00000460031 2726 ntTSL 518.8■□□□□ 0.65e-7■■■□□ 18.9
SND1Q7KZF4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.415e-7■■■□□ 18.9
SND1Q7KZF4 P3H1-214ENST00000495874 2813 ntTSL 217.51■□□□□ 0.395e-7■■■□□ 18.9
SND1Q7KZF4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.345e-7■■■□□ 18.9
SND1Q7KZF4 MCAM-208ENST00000528533 3164 ntTSL 513.59□□□□□ -0.233e-7■■■□□ 18.9
SND1Q7KZF4 MCAM-204ENST00000525586 4865 ntTSL 513.54□□□□□ -0.243e-7■■■□□ 18.9
SND1Q7KZF4 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.253e-7■■■□□ 18.9
SND1Q7KZF4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.716e-7■■■□□ 18.9
SND1Q7KZF4 ERAP1-209ENST00000514604 870 ntTSL 56.12□□□□□ -1.436e-7■■■□□ 18.9
SND1Q7KZF4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.384e-7■■■□□ 18.9
SND1Q7KZF4 LRRD1-202ENST00000422722 3511 ntTSL 213.61□□□□□ -0.234e-7■■■□□ 18.9
SND1Q7KZF4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.29□□□□□ -1.084e-7■■■□□ 18.9
SND1Q7KZF4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.835e-10■■■□□ 18.9
SND1Q7KZF4 NCSTN-206ENST00000435149 824 ntTSL 38.37□□□□□ -1.077e-7■■■□□ 18.9
SND1Q7KZF4 PLOD1-202ENST00000358133 819 ntTSL 314.42□□□□□ -0.16e-10■■■□□ 18.9
SND1Q7KZF4 ICAM1-205ENST00000592686 571 ntTSL 215.02■□□□□ -03e-15■■■□□ 18.9
SND1Q7KZF4 TXNDC5-203ENST00000469459 715 ntTSL 212.29□□□□□ -0.442e-12■■■□□ 18.9
SND1Q7KZF4 CPE-205ENST00000513982 564 ntTSL 48.37□□□□□ -1.071e-8■■■□□ 18.9
SND1Q7KZF4 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.388e-11■■■□□ 18.9
SND1Q7KZF4 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC9.98□□□□□ -0.818e-11■■■□□ 18.9
SND1Q7KZF4 TBL2-206ENST00000433464 1423 ntTSL 227.99■■■□□ 2.075e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-207ENST00000435792 1109 ntTSL 326.91■■□□□ 1.93e-8■■■□□ 18.9
SND1Q7KZF4 TBL2-211ENST00000452475 1262 ntTSL 326.65■■□□□ 1.863e-8■■■□□ 18.9
SND1Q7KZF4 TBL2-203ENST00000424598 2276 ntTSL 226.08■■□□□ 1.775e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.36■■□□□ 1.655e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-204ENST00000426966 1196 ntTSL 325.02■■□□□ 1.65e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-209ENST00000450285 2209 ntTSL 1 (best)23.33■■□□□ 1.335e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-208ENST00000437521 834 ntTSL 322.81■■□□□ 1.243e-8■■■□□ 18.9
SND1Q7KZF4 TBL2-217ENST00000476136 559 ntTSL 422.26■■□□□ 1.153e-8■■■□□ 18.9
SND1Q7KZF4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.695e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-202ENST00000417008 1717 ntTSL 518.91■□□□□ 0.625e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-210ENST00000452125 576 ntTSL 418.8■□□□□ 0.63e-8■■■□□ 18.9
SND1Q7KZF4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.38■□□□□ 0.375e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-214ENST00000465279 762 ntTSL 316.91■□□□□ 0.33e-8■■■□□ 18.9
SND1Q7KZF4 TBL2-213ENST00000459913 2358 ntTSL 514.68□□□□□ -0.065e-7■■■□□ 18.9
SND1Q7KZF4 TBL2-218ENST00000479892 494 ntTSL 47.33□□□□□ -1.243e-8■■■□□ 18.9
SND1Q7KZF4 SARAF-204ENST00000518296 878 ntTSL 29.77□□□□□ -0.851e-7■■■□□ 18.9
SND1Q7KZF4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.447e-8■■■□□ 18.9
SND1Q7KZF4 CLU-216ENST00000523589 878 ntTSL 316.71■□□□□ 0.277e-14■■■□□ 18.9
SND1Q7KZF4 CDK1-207ENST00000519078 723 ntTSL 38.07□□□□□ -1.121e-10■■■□□ 18.9
SND1Q7KZF4 CDK1-205ENST00000475504 1720 ntTSL 27.47□□□□□ -1.211e-10■■■□□ 18.9
SND1Q7KZF4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.386e-9■■■□□ 18.9
SND1Q7KZF4 HNRNPM-207ENST00000597081 1004 ntTSL 521.19■□□□□ 0.983e-12■■■□□ 18.9
SND1Q7KZF4 HNRNPM-208ENST00000597270 1147 ntTSL 220.95■□□□□ 0.946e-9■■■□□ 18.9
SND1Q7KZF4 ADPGK-213ENST00000569534 2262 ntTSL 220.82■□□□□ 0.928e-7■■■□□ 18.9
SND1Q7KZF4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.918e-7■■■□□ 18.9
SND1Q7KZF4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.836e-9■■■□□ 18.9
SND1Q7KZF4 HNRNPM-214ENST00000600806 2373 ntTSL 519.95■□□□□ 0.786e-9■■■□□ 18.9
SND1Q7KZF4 HNRNPM-204ENST00000594907 1078 ntTSL 519.69■□□□□ 0.746e-9■■■□□ 18.9
SND1Q7KZF4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.656e-9■■■□□ 18.9
SND1Q7KZF4 HNRNPM-211ENST00000598603 784 ntTSL 219.08■□□□□ 0.646e-9■■■□□ 18.9
SND1Q7KZF4 ADPGK-210ENST00000567941 2716 ntTSL 1 (best)18.22■□□□□ 0.518e-7■■■□□ 18.9
SND1Q7KZF4 ADPGK-212ENST00000569517 951 ntTSL 517.76■□□□□ 0.438e-7■■■□□ 18.9
Retrieved 100 of 13,567 protein–RNA pairs in 282.5 ms