RNA–Protein interactions for RNA: ENST00000528533.5

MCAM-208, Transcript of melanoma cell adhesion molecule, humanhuman

TSL 5

Gene MCAM, Length 3,164 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCAM-208ENST00000528533 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
MCAM-208ENST00000528533 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.12
MCAM-208ENST00000528533 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
MCAM-208ENST00000528533 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
MCAM-208ENST00000528533 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
MCAM-208ENST00000528533 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
MCAM-208ENST00000528533 DCAF1Q9Y4B6 1507 aa21.18■□□□□ 0.98
MCAM-208ENST00000528533 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
MCAM-208ENST00000528533 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
MCAM-208ENST00000528533 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
MCAM-208ENST00000528533 ABCC9O60706 1549 aa20.6■□□□□ 0.89
MCAM-208ENST00000528533 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
MCAM-208ENST00000528533 LOC105371045A0A1W2PR82 267 aa20.34■□□□□ 0.85
MCAM-208ENST00000528533 NACADO15069 1562 aa20.32■□□□□ 0.84
MCAM-208ENST00000528533 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
MCAM-208ENST00000528533 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
MCAM-208ENST00000528533 HRCP23327 699 aa20.19■□□□□ 0.82
MCAM-208ENST00000528533 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
MCAM-208ENST00000528533 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
MCAM-208ENST00000528533 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
MCAM-208ENST00000528533 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
MCAM-208ENST00000528533 WIZO95785 1651 aa19.99■□□□□ 0.79
MCAM-208ENST00000528533 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
MCAM-208ENST00000528533 TRIM26Q12899 539 aaPredicted RBP19.84■□□□□ 0.77
MCAM-208ENST00000528533 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
MCAM-208ENST00000528533 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
MCAM-208ENST00000528533 EHMT2Q96KQ7 1210 aa19.77■□□□□ 0.76
MCAM-208ENST00000528533 UNC13AQ9UPW8 1703 aa19.74■□□□□ 0.75
MCAM-208ENST00000528533 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
MCAM-208ENST00000528533 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
MCAM-208ENST00000528533 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
MCAM-208ENST00000528533 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
MCAM-208ENST00000528533 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
MCAM-208ENST00000528533 MYT1Q01538 1121 aa19.54■□□□□ 0.72
MCAM-208ENST00000528533 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
MCAM-208ENST00000528533 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
MCAM-208ENST00000528533 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
MCAM-208ENST00000528533 SOGA1O94964 1423 aa19.34■□□□□ 0.69
MCAM-208ENST00000528533 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
MCAM-208ENST00000528533 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
MCAM-208ENST00000528533 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
MCAM-208ENST00000528533 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
MCAM-208ENST00000528533 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
MCAM-208ENST00000528533 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
MCAM-208ENST00000528533 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
MCAM-208ENST00000528533 EEA1Q15075 1411 aa19.18■□□□□ 0.66
MCAM-208ENST00000528533 TNIKQ9UKE5 1360 aa19.18■□□□□ 0.66
MCAM-208ENST00000528533 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
MCAM-208ENST00000528533 UBTFP17480 764 aaKnown RBP19.13■□□□□ 0.65
MCAM-208ENST00000528533 TTBK1Q5TCY1 1321 aaPredicted RBP19.12■□□□□ 0.65
MCAM-208ENST00000528533 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
MCAM-208ENST00000528533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.09■□□□□ 0.65
MCAM-208ENST00000528533 GOLGA3Q08378 1498 aa19.07■□□□□ 0.64
MCAM-208ENST00000528533 CCER1Q8TC90 406 aaPredicted RBP19.01■□□□□ 0.63
MCAM-208ENST00000528533 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
MCAM-208ENST00000528533 KIF21BO75037 1637 aa18.94■□□□□ 0.62
MCAM-208ENST00000528533 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
MCAM-208ENST00000528533 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
MCAM-208ENST00000528533 CLIP1P30622 1438 aa18.86■□□□□ 0.61
MCAM-208ENST00000528533 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
MCAM-208ENST00000528533 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
MCAM-208ENST00000528533 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
MCAM-208ENST00000528533 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
MCAM-208ENST00000528533 RANGAP1P46060 587 aaPredicted RBP18.78■□□□□ 0.6
MCAM-208ENST00000528533 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
MCAM-208ENST00000528533 CUX1P39880 1505 aa18.71■□□□□ 0.59
MCAM-208ENST00000528533 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
MCAM-208ENST00000528533 PRXQ9BXM0 1461 aa18.68■□□□□ 0.58
MCAM-208ENST00000528533 CFTRP13569 1480 aa18.67■□□□□ 0.58
MCAM-208ENST00000528533 APLP2Q06481 763 aa18.65■□□□□ 0.58
MCAM-208ENST00000528533 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
MCAM-208ENST00000528533 DIEXFQ68CQ4 756 aaKnown RBP18.61■□□□□ 0.57
MCAM-208ENST00000528533 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
MCAM-208ENST00000528533 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
MCAM-208ENST00000528533 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
MCAM-208ENST00000528533 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
MCAM-208ENST00000528533 ZNF316A6NFI3 1004 aaPredicted RBP18.48■□□□□ 0.55
MCAM-208ENST00000528533 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
MCAM-208ENST00000528533 CUX2O14529 1486 aa18.44■□□□□ 0.54
MCAM-208ENST00000528533 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
MCAM-208ENST00000528533 IGF1RP08069 1367 aa18.42■□□□□ 0.54
MCAM-208ENST00000528533 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
MCAM-208ENST00000528533 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
MCAM-208ENST00000528533 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
MCAM-208ENST00000528533 FGD5Q6ZNL6 1462 aa18.38■□□□□ 0.53
MCAM-208ENST00000528533 RRBP1Q9P2E9 1410 aaKnown RBP18.33■□□□□ 0.52
MCAM-208ENST00000528533 CARMIL1Q5VZK9 1371 aa18.33■□□□□ 0.52
MCAM-208ENST00000528533 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
MCAM-208ENST00000528533 PRKCSHP14314 528 aaPredicted RBP18.29■□□□□ 0.52
MCAM-208ENST00000528533 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
MCAM-208ENST00000528533 CENPBP07199 599 aaPredicted RBP18.28■□□□□ 0.52
MCAM-208ENST00000528533 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
MCAM-208ENST00000528533 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
MCAM-208ENST00000528533 MIER1Q8N108 512 aa18.24■□□□□ 0.51
MCAM-208ENST00000528533 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
MCAM-208ENST00000528533 ITGAEP38570 1179 aa18.21■□□□□ 0.51
MCAM-208ENST00000528533 BCL11AQ9H165 835 aa18.21■□□□□ 0.51
MCAM-208ENST00000528533 NESP48681 1621 aa18.21■□□□□ 0.51
MCAM-208ENST00000528533 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
MCAM-208ENST00000528533 TIAM1Q13009 1591 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms