RNA–Protein interactions for RNA: ENST00000525586.5

MCAM-204, Transcript of melanoma cell adhesion molecule, humanhuman

TSL 5

Gene MCAM, Length 4,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCAM-204ENST00000525586 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
MCAM-204ENST00000525586 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
MCAM-204ENST00000525586 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
MCAM-204ENST00000525586 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
MCAM-204ENST00000525586 SUPT5HO00267 1087 aaKnown RBP20.31■□□□□ 0.84
MCAM-204ENST00000525586 ABCC9O60706 1549 aa19.73■□□□□ 0.75
MCAM-204ENST00000525586 APLP2Q06481 763 aa19.62■□□□□ 0.73
MCAM-204ENST00000525586 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
MCAM-204ENST00000525586 CCDC180Q9P1Z9 1646 aa19.15■□□□□ 0.66
MCAM-204ENST00000525586 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
MCAM-204ENST00000525586 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
MCAM-204ENST00000525586 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
MCAM-204ENST00000525586 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
MCAM-204ENST00000525586 RANGAP1P46060 587 aaPredicted RBP18.89■□□□□ 0.62
MCAM-204ENST00000525586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
MCAM-204ENST00000525586 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
MCAM-204ENST00000525586 UBTFP17480 764 aaKnown RBP18.87■□□□□ 0.61
MCAM-204ENST00000525586 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
MCAM-204ENST00000525586 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
MCAM-204ENST00000525586 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
MCAM-204ENST00000525586 FBLN2P98095 1184 aa18.69■□□□□ 0.58
MCAM-204ENST00000525586 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
MCAM-204ENST00000525586 NACADO15069 1562 aa18.59■□□□□ 0.57
MCAM-204ENST00000525586 NPM1P06748 294 aaKnown RBP eCLIP18.52■□□□□ 0.56
MCAM-204ENST00000525586 ESF1Q9H501 851 aaKnown RBP18.26■□□□□ 0.51
MCAM-204ENST00000525586 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
MCAM-204ENST00000525586 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
MCAM-204ENST00000525586 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
MCAM-204ENST00000525586 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
MCAM-204ENST00000525586 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
MCAM-204ENST00000525586 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
MCAM-204ENST00000525586 ZEB1P37275 1124 aaPredicted RBP17.97■□□□□ 0.47
MCAM-204ENST00000525586 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
MCAM-204ENST00000525586 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
MCAM-204ENST00000525586 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
MCAM-204ENST00000525586 BCANQ96GW7 911 aa17.91■□□□□ 0.46
MCAM-204ENST00000525586 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
MCAM-204ENST00000525586 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
MCAM-204ENST00000525586 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
MCAM-204ENST00000525586 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
MCAM-204ENST00000525586 ITGAEP38570 1179 aa17.86■□□□□ 0.45
MCAM-204ENST00000525586 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
MCAM-204ENST00000525586 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.43
MCAM-204ENST00000525586 STAG3Q9UJ98 1225 aa17.75■□□□□ 0.43
MCAM-204ENST00000525586 PPARGC1BQ86YN6 1023 aaKnown RBP17.73■□□□□ 0.43
MCAM-204ENST00000525586 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
MCAM-204ENST00000525586 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
MCAM-204ENST00000525586 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
MCAM-204ENST00000525586 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
MCAM-204ENST00000525586 MYT1Q01538 1121 aa17.68■□□□□ 0.42
MCAM-204ENST00000525586 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
MCAM-204ENST00000525586 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
MCAM-204ENST00000525586 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
MCAM-204ENST00000525586 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
MCAM-204ENST00000525586 ARID3CA6NKF2 412 aa17.64■□□□□ 0.41
MCAM-204ENST00000525586 P3H3Q8IVL6 736 aa17.64■□□□□ 0.41
MCAM-204ENST00000525586 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
MCAM-204ENST00000525586 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
MCAM-204ENST00000525586 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
MCAM-204ENST00000525586 EEA1Q15075 1411 aa17.52■□□□□ 0.4
MCAM-204ENST00000525586 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
MCAM-204ENST00000525586 PLEKHD1A6NEE1 506 aa17.5■□□□□ 0.39
MCAM-204ENST00000525586 TSPY4P0CV99 314 aa17.47■□□□□ 0.39
MCAM-204ENST00000525586 TSPY10P0CW01 314 aa17.47■□□□□ 0.39
MCAM-204ENST00000525586 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
MCAM-204ENST00000525586 KIF27Q86VH2 1401 aa17.46■□□□□ 0.39
MCAM-204ENST00000525586 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
MCAM-204ENST00000525586 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
MCAM-204ENST00000525586 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
MCAM-204ENST00000525586 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
MCAM-204ENST00000525586 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
MCAM-204ENST00000525586 NEFMP07197 916 aa17.32■□□□□ 0.36
MCAM-204ENST00000525586 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
MCAM-204ENST00000525586 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
MCAM-204ENST00000525586 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
MCAM-204ENST00000525586 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.35
MCAM-204ENST00000525586 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
MCAM-204ENST00000525586 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
MCAM-204ENST00000525586 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
MCAM-204ENST00000525586 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
MCAM-204ENST00000525586 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
MCAM-204ENST00000525586 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
MCAM-204ENST00000525586 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
MCAM-204ENST00000525586 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
MCAM-204ENST00000525586 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
MCAM-204ENST00000525586 CLIP1P30622 1438 aa17.19■□□□□ 0.34
MCAM-204ENST00000525586 CUX2O14529 1486 aa17.19■□□□□ 0.34
MCAM-204ENST00000525586 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
MCAM-204ENST00000525586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.34
MCAM-204ENST00000525586 SOGA1O94964 1423 aa17.17■□□□□ 0.34
MCAM-204ENST00000525586 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
MCAM-204ENST00000525586 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
MCAM-204ENST00000525586 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
MCAM-204ENST00000525586 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
MCAM-204ENST00000525586 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
MCAM-204ENST00000525586 NEFLP07196 543 aa17.11■□□□□ 0.33
MCAM-204ENST00000525586 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
MCAM-204ENST00000525586 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
MCAM-204ENST00000525586 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
MCAM-204ENST00000525586 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms