Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.75■□□□□ 0.59
RFPL4BQ6ZWI9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 AC079089.2-201ENST00000531211 1277 ntBASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL4BQ6ZWI9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 AC105265.2-201ENST00000467189 838 ntBASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RFPL4BQ6ZWI9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RFPL4BQ6ZWI9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.71■□□□□ 0.59
RFPL4BQ6ZWI9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RFPL4BQ6ZWI9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.7■□□□□ 0.58
RFPL4BQ6ZWI9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.7■□□□□ 0.58
RFPL4BQ6ZWI9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RFPL4BQ6ZWI9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFPL4BQ6ZWI9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RFPL4BQ6ZWI9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFPL4BQ6ZWI9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms