Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 BRD9-207ENST00000489093 1139 ntTSL 312.94□□□□□ -0.341e-6■■■□□ 17.4
SRSF1Q07955 SRSF11-204ENST00000395136 1408 ntTSL 1 (best)23.99■■□□□ 1.435e-7■■■□□ 17.4
SRSF1Q07955 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.383e-7■■■□□ 17.4
SRSF1Q07955 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.333e-7■■■□□ 17.4
SRSF1Q07955 SRSF11-214ENST00000484162 4008 ntTSL 1 (best)5.32□□□□□ -1.564e-7■■■□□ 17.4
SRSF1Q07955 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.03□□□□□ -1.764e-7■■■□□ 17.4
SRSF1Q07955 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.812e-8■■■□□ 17.4
SRSF1Q07955 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.842e-8■■■□□ 17.4
SRSF1Q07955 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.92e-8■■■□□ 17.4
SRSF1Q07955 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.952e-8■■■□□ 17.4
SRSF1Q07955 SNX5-204ENST00000431277 840 ntTSL 514.82□□□□□ -0.042e-24■■■□□ 17.4
SRSF1Q07955 TPR-206ENST00000481347 2727 ntTSL 58.67□□□□□ -1.027e-8■■■□□ 17.4
SRSF1Q07955 COPB1-206ENST00000529210 607 ntTSL 411.43□□□□□ -0.583e-14■■■□□ 17.4
SRSF1Q07955 COPB1-207ENST00000529866 729 ntTSL 210.76□□□□□ -0.693e-14■■■□□ 17.4
SRSF1Q07955 COPB1-210ENST00000533533 537 ntTSL 48.67□□□□□ -1.023e-14■■■□□ 17.4
SRSF1Q07955 COPB1-211ENST00000534234 1584 ntTSL 58.56□□□□□ -1.043e-14■■■□□ 17.4
SRSF1Q07955 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.193e-14■■■□□ 17.4
SRSF1Q07955 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.283e-14■■■□□ 17.4
SRSF1Q07955 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.43e-14■■■□□ 17.4
SRSF1Q07955 COPB1-212ENST00000534771 576 ntTSL 41.17□□□□□ -2.223e-14■■■□□ 17.4
SRSF1Q07955 ZNF692-211ENST00000477070 1521 ntTSL 518.68■□□□□ 0.583e-6■■■□□ 17.4
SRSF1Q07955 PIEZO1-214ENST00000521877 686 ntTSL 216.85■□□□□ 0.296e-13■■■□□ 17.4
SRSF1Q07955 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.156e-9■■■□□ 17.4
SRSF1Q07955 ZNF692-227ENST00000533927 2026 ntTSL 1 (best)14.1□□□□□ -0.153e-6■■■□□ 17.4
SRSF1Q07955 NBEAL2-201ENST00000416683 6364 ntTSL 1 (best)13.64□□□□□ -0.233e-6■■■□□ 17.4
SRSF1Q07955 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.276e-9■■■□□ 17.4
SRSF1Q07955 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.313e-6■■■□□ 17.4
SRSF1Q07955 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.346e-9■■■□□ 17.4
SRSF1Q07955 ZNF692-216ENST00000491971 805 ntTSL 212.63□□□□□ -0.393e-6■■■□□ 17.4
SRSF1Q07955 PIEZO1-213ENST00000518793 660 ntTSL 311.89□□□□□ -0.516e-13■■■□□ 17.4
SRSF1Q07955 METTL17-210ENST00000554751 556 ntTSL 511.58□□□□□ -0.566e-9■■■□□ 17.4
SRSF1Q07955 METTL17-216ENST00000555533 1605 ntTSL 1 (best)11.49□□□□□ -0.576e-9■■■□□ 17.4
SRSF1Q07955 METTL17-204ENST00000553441 635 ntTSL 211.13□□□□□ -0.636e-9■■■□□ 17.4
SRSF1Q07955 NOP56-219ENST00000612233 2980 nt11.02□□□□□ -0.646e-17■■■□□ 17.4
SRSF1Q07955 METTL17-224ENST00000557550 1529 ntTSL 59.82□□□□□ -0.846e-9■■■□□ 17.4
SRSF1Q07955 METTL17-223ENST00000557279 730 ntTSL 39.37□□□□□ -0.916e-9■■■□□ 17.4
SRSF1Q07955 METTL17-219ENST00000555902 868 ntTSL 39.04□□□□□ -0.966e-9■■■□□ 17.4
SRSF1Q07955 METTL17-217ENST00000555640 2887 ntTSL 58.82□□□□□ -16e-9■■■□□ 17.4
SRSF1Q07955 NOP56-207ENST00000467196 1320 ntTSL 58.6□□□□□ -1.036e-17■■■□□ 17.4
SRSF1Q07955 NOP56-214ENST00000484998 998 ntTSL 58.48□□□□□ -1.056e-17■■■□□ 17.4
SRSF1Q07955 METTL17-208ENST00000554354 249 ntTSL 57.86□□□□□ -1.156e-9■■■□□ 17.4
SRSF1Q07955 METTL17-218ENST00000555670 803 ntTSL 57.71□□□□□ -1.186e-9■■■□□ 17.4
SRSF1Q07955 METTL17-206ENST00000553564 900 ntTSL 56.69□□□□□ -1.346e-9■■■□□ 17.4
SRSF1Q07955 METTL17-215ENST00000555390 551 ntTSL 33.75□□□□□ -1.816e-9■■■□□ 17.4
SRSF1Q07955 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.082e-10■■■□□ 17.4
SRSF1Q07955 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.06□□□□□ -0.165e-9■■■□□ 17.4
SRSF1Q07955 PDXDC1-209ENST00000563667 554 ntTSL 413.68□□□□□ -0.225e-9■■■□□ 17.4
SRSF1Q07955 PDXDC1-211ENST00000565362 720 ntTSL 510.39□□□□□ -0.755e-9■■■□□ 17.4
SRSF1Q07955 PDXDC1-208ENST00000563522 556 ntTSL 48.21□□□□□ -1.15e-9■■■□□ 17.4
SRSF1Q07955 FBXO44-207ENST00000425796 994 ntTSL 317.78■□□□□ 0.449e-6■■■□□ 17.4
SRSF1Q07955 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.46■□□□□ 0.229e-6■■■□□ 17.4
SRSF1Q07955 TCF25-218ENST00000566283 515 ntTSL 216.04■□□□□ 0.161e-10■■■□□ 17.4
SRSF1Q07955 TCF25-216ENST00000565860 437 ntTSL 316.04■□□□□ 0.161e-10■■■□□ 17.4
SRSF1Q07955 TCF25-213ENST00000564957 459 ntTSL 316.04■□□□□ 0.161e-10■■■□□ 17.4
SRSF1Q07955 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.75■□□□□ 0.119e-6■■■□□ 17.4
SRSF1Q07955 TCF25-220ENST00000567171 1535 ntTSL 214.98□□□□□ -0.011e-10■■■□□ 17.4
SRSF1Q07955 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.22□□□□□ -0.139e-6■■■□□ 17.4
SRSF1Q07955 TCF25-207ENST00000562256 1879 ntTSL 1 (best)14.08□□□□□ -0.161e-7■■■□□ 17.4
SRSF1Q07955 FBXO44-209ENST00000475435 942 ntTSL 313.16□□□□□ -0.39e-6■■■□□ 17.4
SRSF1Q07955 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.69□□□□□ -0.381e-7■■■□□ 17.4
SRSF1Q07955 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.381e-7■■■□□ 17.4
SRSF1Q07955 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.5□□□□□ -0.419e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.589e-6■■■□□ 17.4
SRSF1Q07955 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.839e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC8.92□□□□□ -0.989e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.099e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC8.27□□□□□ -1.099e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-215ENST00000625837 3237 ntTSL 5 BASIC8.22□□□□□ -1.099e-6■■■□□ 17.4
SRSF1Q07955 FBXO44-206ENST00000376770 3320 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.19e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC8□□□□□ -1.139e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-211ENST00000615742 485 ntTSL 48□□□□□ -1.139e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-222ENST00000631641 583 ntTSL 38□□□□□ -1.139e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-221ENST00000630858 3181 ntTSL 57.71□□□□□ -1.179e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-205ENST00000480592 1001 ntTSL 1 (best)7.69□□□□□ -1.189e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-218ENST00000629785 3457 ntTSL 57.69□□□□□ -1.189e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-219ENST00000630255 3289 ntTSL 57.66□□□□□ -1.189e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-220ENST00000630370 3120 ntTSL 57.63□□□□□ -1.199e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-204ENST00000478993 3397 ntTSL 1 (best)7.47□□□□□ -1.219e-6■■■□□ 17.4
SRSF1Q07955 DDX3X-207ENST00000610559 542 ntTSL 47.45□□□□□ -1.229e-6■■■□□ 17.4
SRSF1Q07955 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.691e-6■■■□□ 17.4
SRSF1Q07955 PRPF38A-202ENST00000474048 1059 ntTSL 1 (best)8.66□□□□□ -1.021e-6■■■□□ 17.4
SRSF1Q07955 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.8■□□□□ 0.289e-9■■■□□ 17.4
SRSF1Q07955 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.29e-9■■■□□ 17.4
SRSF1Q07955 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.42□□□□□ -0.429e-9■■■□□ 17.4
SRSF1Q07955 SFPQ-202ENST00000460428 464 ntTSL 26.51□□□□□ -1.374e-7■■■□□ 17.3
SRSF1Q07955 SFPQ-206ENST00000470472 874 ntTSL 53.54□□□□□ -1.844e-7■■■□□ 17.3
SRSF1Q07955 SKIV2L-209ENST00000483553 1307 ntTSL 515.78■□□□□ 0.124e-7■■■□□ 17.3
SRSF1Q07955 SKIV2L-207ENST00000471818 706 ntTSL 514.93□□□□□ -0.024e-7■■■□□ 17.3
SRSF1Q07955 SKIV2L-213ENST00000491994 866 ntTSL 214.5□□□□□ -0.098e-8■■■□□ 17.3
SRSF1Q07955 SKIV2L-204ENST00000465703 4507 ntTSL 1 (best)12.57□□□□□ -0.44e-7■■■□□ 17.3
SRSF1Q07955 SKIV2L-208ENST00000474839 3378 ntTSL 29.3□□□□□ -0.924e-7■■■□□ 17.3
SRSF1Q07955 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.034e-7■■■□□ 17.3
SRSF1Q07955 GOLGA2-209ENST00000490257 1964 ntTSL 215.89■□□□□ 0.136e-8■■■□□ 17.3
SRSF1Q07955 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.813e-6■■■□□ 17.3
SRSF1Q07955 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC10.04□□□□□ -0.82e-7■■■□□ 17.3
SRSF1Q07955 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.112e-7■■■□□ 17.3
SRSF1Q07955 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC7.31□□□□□ -1.242e-7■■■□□ 17.3
SRSF1Q07955 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC6.67□□□□□ -1.342e-7■■■□□ 17.3
SRSF1Q07955 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.054e-6■■■□□ 17.3
SRSF1Q07955 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.244e-6■■■□□ 17.3
Retrieved 100 of 14,836 protein–RNA pairs in 99.1 ms