Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL20P78556 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCL20P78556 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL20P78556 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCL20P78556 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL20P78556 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL20P78556 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL20P78556 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL20P78556 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL20P78556 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL20P78556 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.61■□□□□ 0.25
CCL20P78556 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCL20P78556 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCL20P78556 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL20P78556 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 DUX4L9-201ENST00000449051 1259 ntBASIC16.61■□□□□ 0.25
CCL20P78556 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.61■□□□□ 0.25
CCL20P78556 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.61■□□□□ 0.25
CCL20P78556 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL20P78556 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL20P78556 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL20P78556 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL20P78556 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL20P78556 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCL20P78556 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCL20P78556 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL20P78556 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL20P78556 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL20P78556 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL20P78556 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCL20P78556 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL20P78556 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CCL20P78556 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCL20P78556 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL20P78556 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.59■□□□□ 0.25
CCL20P78556 BX323043.1-201ENST00000641006 1765 ntBASIC16.59■□□□□ 0.25
CCL20P78556 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL20P78556 AC120024.1-201ENST00000562672 995 ntBASIC16.59■□□□□ 0.25
CCL20P78556 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.59■□□□□ 0.25
CCL20P78556 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.59■□□□□ 0.25
CCL20P78556 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CCL20P78556 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.59■□□□□ 0.25
CCL20P78556 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.59■□□□□ 0.25
CCL20P78556 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.59■□□□□ 0.25
CCL20P78556 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCL20P78556 AC020907.5-201ENST00000624372 1936 ntBASIC16.58■□□□□ 0.25
CCL20P78556 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCL20P78556 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CCL20P78556 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.58■□□□□ 0.25
CCL20P78556 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCL20P78556 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCL20P78556 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.58■□□□□ 0.25
CCL20P78556 AC116562.4-201ENST00000641316 2276 ntBASIC16.58■□□□□ 0.25
CCL20P78556 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCL20P78556 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCL20P78556 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCL20P78556 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCL20P78556 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 ABHD17AP4-201ENST00000411545 909 ntBASIC16.58■□□□□ 0.24
CCL20P78556 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.58■□□□□ 0.24
CCL20P78556 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL20P78556 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.58■□□□□ 0.24
CCL20P78556 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL20P78556 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL20P78556 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL20P78556 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL20P78556 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCL20P78556 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCL20P78556 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL20P78556 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL20P78556 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL20P78556 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL20P78556 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCL20P78556 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
CCL20P78556 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms