Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 DUX4L8-201ENST00000629013 1275 ntBASIC21.05■□□□□ 0.96
ZNF140P52738 DUX4L3-201ENST00000630187 1275 ntBASIC21.05■□□□□ 0.96
ZNF140P52738 DUX4L7-201ENST00000630678 1275 ntBASIC21.05■□□□□ 0.96
ZNF140P52738 DUX4L5-201ENST00000630834 1275 ntBASIC21.05■□□□□ 0.96
ZNF140P52738 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF140P52738 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ZNF140P52738 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ZNF140P52738 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF140P52738 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ZNF140P52738 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF140P52738 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.04■□□□□ 0.96
ZNF140P52738 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF140P52738 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.04■□□□□ 0.96
ZNF140P52738 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ZNF140P52738 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF140P52738 AL137060.1-201ENST00000618151 2648 ntBASIC21.04■□□□□ 0.96
ZNF140P52738 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF140P52738 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF140P52738 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF140P52738 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF140P52738 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF140P52738 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF140P52738 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF140P52738 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF140P52738 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF140P52738 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF140P52738 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF140P52738 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF140P52738 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.03■□□□□ 0.96
ZNF140P52738 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNF140P52738 AC138907.5-202ENST00000569484 235 ntBASIC21.03■□□□□ 0.96
ZNF140P52738 KRT18P61-201ENST00000585825 1298 ntBASIC21.03■□□□□ 0.96
ZNF140P52738 AF106564.1-201ENST00000607058 2553 ntBASIC21.03■□□□□ 0.96
ZNF140P52738 AC004854.2-201ENST00000608450 1441 ntBASIC21.03■□□□□ 0.96
ZNF140P52738 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF140P52738 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
ZNF140P52738 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF140P52738 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF140P52738 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF140P52738 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF140P52738 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF140P52738 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF140P52738 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF140P52738 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF140P52738 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF140P52738 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF140P52738 AC087623.3-201ENST00000607047 1098 ntBASIC21.02■□□□□ 0.96
ZNF140P52738 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ZNF140P52738 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF140P52738 AC005229.4-201ENST00000610085 2198 ntBASIC21.02■□□□□ 0.95
ZNF140P52738 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 AP004607.4-201ENST00000530158 1459 ntBASIC21.01■□□□□ 0.95
ZNF140P52738 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ZNF140P52738 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF140P52738 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.01■□□□□ 0.95
ZNF140P52738 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.01■□□□□ 0.95
ZNF140P52738 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF140P52738 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 AC061975.6-201ENST00000579045 1553 ntBASIC21.01■□□□□ 0.95
ZNF140P52738 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF140P52738 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZNF140P52738 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF140P52738 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
ZNF140P52738 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF140P52738 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21■□□□□ 0.95
ZNF140P52738 AC026271.2-201ENST00000428091 497 ntBASIC21■□□□□ 0.95
ZNF140P52738 AC010141.2-201ENST00000452426 721 ntBASIC21■□□□□ 0.95
ZNF140P52738 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21■□□□□ 0.95
ZNF140P52738 AC104187.1-201ENST00000607510 612 ntBASIC21■□□□□ 0.95
ZNF140P52738 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF140P52738 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21■□□□□ 0.95
ZNF140P52738 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ZNF140P52738 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21■□□□□ 0.95
ZNF140P52738 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF140P52738 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZNF140P52738 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
ZNF140P52738 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF140P52738 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF140P52738 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF140P52738 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms