Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A3P43003 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC1A3P43003 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC1A3P43003 IRS3P-201ENST00000223076 1006 ntBASIC19.35■□□□□ 0.69
SLC1A3P43003 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC1A3P43003 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC1A3P43003 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A3P43003 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC1A3P43003 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A3P43003 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A3P43003 AC055733.4-201ENST00000638462 1354 ntBASIC19.34■□□□□ 0.69
SLC1A3P43003 AC005224.4-201ENST00000583262 1652 ntBASIC19.34■□□□□ 0.69
SLC1A3P43003 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A3P43003 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SLC1A3P43003 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC1A3P43003 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A3P43003 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A3P43003 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC1A3P43003 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC1A3P43003 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC1A3P43003 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A3P43003 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SLC1A3P43003 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A3P43003 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A3P43003 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A3P43003 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
SLC1A3P43003 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.33■□□□□ 0.69
SLC1A3P43003 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A3P43003 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC1A3P43003 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC1A3P43003 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
SLC1A3P43003 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC1A3P43003 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC1A3P43003 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC1A3P43003 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC1A3P43003 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC1A3P43003 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC1A3P43003 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SLC1A3P43003 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A3P43003 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A3P43003 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SLC1A3P43003 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SLC1A3P43003 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC1A3P43003 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.32■□□□□ 0.68
SLC1A3P43003 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC1A3P43003 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC1A3P43003 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC1A3P43003 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 AF106564.1-201ENST00000607058 2553 ntBASIC19.32■□□□□ 0.68
SLC1A3P43003 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A3P43003 FEM1AP4-201ENST00000443167 1987 ntBASIC19.32■□□□□ 0.68
SLC1A3P43003 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A3P43003 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A3P43003 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC1A3P43003 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SLC1A3P43003 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A3P43003 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A3P43003 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A3P43003 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC1A3P43003 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC1A3P43003 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A3P43003 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SLC1A3P43003 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A3P43003 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A3P43003 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC1A3P43003 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC1A3P43003 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A3P43003 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A3P43003 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
SLC1A3P43003 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SLC1A3P43003 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.3■□□□□ 0.68
SLC1A3P43003 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A3P43003 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC1A3P43003 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC1A3P43003 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A3P43003 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC1A3P43003 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms