Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPN3P26045 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTPN3P26045 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTPN3P26045 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN3P26045 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN3P26045 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN3P26045 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PTPN3P26045 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN3P26045 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.51■■□□□ 1.03
PTPN3P26045 EEF1DP3-203ENST00000566025 782 ntBASIC21.51■■□□□ 1.03
PTPN3P26045 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PTPN3P26045 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN3P26045 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN3P26045 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN3P26045 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN3P26045 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PTPN3P26045 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.51■■□□□ 1.03
PTPN3P26045 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN3P26045 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN3P26045 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.51■■□□□ 1.03
PTPN3P26045 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN3P26045 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PTPN3P26045 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN3P26045 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN3P26045 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN3P26045 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN3P26045 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN3P26045 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN3P26045 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN3P26045 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN3P26045 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.49■■□□□ 1.03
PTPN3P26045 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.49■■□□□ 1.03
PTPN3P26045 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PTPN3P26045 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN3P26045 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PTPN3P26045 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN3P26045 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN3P26045 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN3P26045 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN3P26045 LINC02228-203ENST00000641970 1355 ntBASIC21.48■■□□□ 1.03
PTPN3P26045 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN3P26045 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN3P26045 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PTPN3P26045 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN3P26045 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN3P26045 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN3P26045 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.48■■□□□ 1.03
PTPN3P26045 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN3P26045 AC053503.5-201ENST00000601508 636 ntBASIC21.48■■□□□ 1.03
PTPN3P26045 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.48■■□□□ 1.03
PTPN3P26045 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN3P26045 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN3P26045 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN3P26045 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN3P26045 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN3P26045 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN3P26045 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN3P26045 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN3P26045 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.47■■□□□ 1.03
PTPN3P26045 AC079140.4-201ENST00000507448 529 ntBASIC21.47■■□□□ 1.03
PTPN3P26045 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN3P26045 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.47■■□□□ 1.03
PTPN3P26045 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN3P26045 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN3P26045 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.46■■□□□ 1.03
PTPN3P26045 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.46■■□□□ 1.03
PTPN3P26045 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.46■■□□□ 1.03
PTPN3P26045 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN3P26045 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PTPN3P26045 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PTPN3P26045 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN3P26045 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN3P26045 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.46■■□□□ 1.03
PTPN3P26045 AC123595.1-201ENST00000440769 1046 ntBASIC21.46■■□□□ 1.03
PTPN3P26045 YBX1P1-201ENST00000445822 960 ntBASIC21.46■■□□□ 1.03
PTPN3P26045 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.46■■□□□ 1.03
PTPN3P26045 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PTPN3P26045 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN3P26045 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN3P26045 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PTPN3P26045 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PTPN3P26045 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PTPN3P26045 KRT87P-202ENST00000534226 1464 ntBASIC21.45■■□□□ 1.03
PTPN3P26045 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN3P26045 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN3P26045 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PTPN3P26045 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN3P26045 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN3P26045 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN3P26045 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.45■■□□□ 1.02
PTPN3P26045 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms