Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NEBP20929 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEBP20929 KRT17P1-201ENST00000399211 1546 ntBASIC8.17□□□□□ -1.1
NEBP20929 AC005224.4-201ENST00000583262 1652 ntBASIC8.17□□□□□ -1.1
NEBP20929 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEBP20929 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEBP20929 MESTP1-201ENST00000404287 994 ntBASIC8.17□□□□□ -1.1
NEBP20929 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC8.17□□□□□ -1.1
NEBP20929 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC8.17□□□□□ -1.1
NEBP20929 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC8.17□□□□□ -1.1
NEBP20929 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEBP20929 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NEBP20929 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC8.17□□□□□ -1.1
NEBP20929 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC8.17□□□□□ -1.1
NEBP20929 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC8.17□□□□□ -1.1
NEBP20929 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NEBP20929 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEBP20929 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 AC128688.1-201ENST00000487626 519 ntBASIC8.16□□□□□ -1.1
NEBP20929 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC8.16□□□□□ -1.1
NEBP20929 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
NEBP20929 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 RBM17P1-201ENST00000453646 1190 ntBASIC8.16□□□□□ -1.1
NEBP20929 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 FITM1-202ENST00000559294 800 ntBASIC8.16□□□□□ -1.1
NEBP20929 CKBP1-201ENST00000565489 1086 ntBASIC8.16□□□□□ -1.1
NEBP20929 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC8.16□□□□□ -1.1
NEBP20929 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 FAM86EP-206ENST00000510506 987 ntBASIC8.16□□□□□ -1.1
NEBP20929 AL589743.5-201ENST00000616611 1050 ntBASIC8.16□□□□□ -1.1
NEBP20929 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC8.16□□□□□ -1.1
NEBP20929 AL445675.2-201ENST00000620291 557 ntBASIC8.16□□□□□ -1.1
NEBP20929 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEBP20929 RPP21-221ENST00000428040 594 ntTSL 2 BASIC8.15□□□□□ -1.1
NEBP20929 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEBP20929 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC8.15□□□□□ -1.1
NEBP20929 AC012313.10-201ENST00000623509 926 ntBASIC8.15□□□□□ -1.1
NEBP20929 ASL-203ENST00000380839 1765 ntTSL 5 BASIC8.15□□□□□ -1.1
NEBP20929 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEBP20929 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEBP20929 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
NEBP20929 ECEL1P2-202ENST00000465689 757 ntBASIC8.15□□□□□ -1.1
NEBP20929 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC8.15□□□□□ -1.1
NEBP20929 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC8.15□□□□□ -1.1
NEBP20929 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC8.15□□□□□ -1.1
NEBP20929 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEBP20929 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC8.15□□□□□ -1.1
NEBP20929 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
NEBP20929 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEBP20929 ATP5G1P1-201ENST00000448724 379 ntBASIC8.15□□□□□ -1.1
NEBP20929 SDHD-206ENST00000528182 754 ntTSL 3 BASIC8.15□□□□□ -1.1
NEBP20929 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
NEBP20929 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NEBP20929 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
NEBP20929 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
NEBP20929 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
NEBP20929 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
NEBP20929 FAM8A6P-201ENST00000407496 1135 ntBASIC8.15□□□□□ -1.11
NEBP20929 PGM5P4-201ENST00000421970 445 ntBASIC8.15□□□□□ -1.11
NEBP20929 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
NEBP20929 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
NEBP20929 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC8.15□□□□□ -1.11
NEBP20929 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC8.15□□□□□ -1.11
NEBP20929 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
NEBP20929 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC8.14□□□□□ -1.11
NEBP20929 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC8.14□□□□□ -1.11
NEBP20929 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
NEBP20929 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC8.14□□□□□ -1.11
NEBP20929 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC8.14□□□□□ -1.11
NEBP20929 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 SHF-207ENST00000560540 2062 ntTSL 5 BASIC8.14□□□□□ -1.11
NEBP20929 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
NEBP20929 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 SKP2-204ENST00000508514 821 ntTSL 3 BASIC8.14□□□□□ -1.11
NEBP20929 AF186192.3-201ENST00000583427 947 ntBASIC8.14□□□□□ -1.11
NEBP20929 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC8.14□□□□□ -1.11
NEBP20929 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 RBM17P2-201ENST00000616397 1405 ntBASIC8.14□□□□□ -1.11
NEBP20929 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NEBP20929 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC8.14□□□□□ -1.11
NEBP20929 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC8.14□□□□□ -1.11
NEBP20929 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms