Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 FBXW4P1-201ENST00000426721 2239 ntBASIC19.44■□□□□ 0.7
PRKCAP17252 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 AC009237.3-201ENST00000393279 1427 ntBASIC19.44■□□□□ 0.7
PRKCAP17252 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PRKCAP17252 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRKCAP17252 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.44■□□□□ 0.7
PRKCAP17252 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.44■□□□□ 0.7
PRKCAP17252 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.43■□□□□ 0.7
PRKCAP17252 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.43■□□□□ 0.7
PRKCAP17252 AP006587.3-201ENST00000525742 1516 ntBASIC19.43■□□□□ 0.7
PRKCAP17252 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.43■□□□□ 0.7
PRKCAP17252 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.43■□□□□ 0.7
PRKCAP17252 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.43■□□□□ 0.7
PRKCAP17252 AC027612.3-201ENST00000413684 1047 ntBASIC19.43■□□□□ 0.7
PRKCAP17252 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.43■□□□□ 0.7
PRKCAP17252 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PRKCAP17252 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 AC019069.1-201ENST00000610008 1333 ntBASIC19.43■□□□□ 0.7
PRKCAP17252 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRKCAP17252 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.42■□□□□ 0.7
PRKCAP17252 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PRKCAP17252 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.42■□□□□ 0.7
PRKCAP17252 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.42■□□□□ 0.7
PRKCAP17252 AC026471.6-201ENST00000622954 1905 ntBASIC19.42■□□□□ 0.7
PRKCAP17252 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PRKCAP17252 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.42■□□□□ 0.7
PRKCAP17252 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRKCAP17252 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.41■□□□□ 0.7
PRKCAP17252 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRKCAP17252 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRKCAP17252 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.41■□□□□ 0.7
PRKCAP17252 AC005224.4-201ENST00000583262 1652 ntBASIC19.41■□□□□ 0.7
PRKCAP17252 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.41■□□□□ 0.7
PRKCAP17252 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.41■□□□□ 0.7
PRKCAP17252 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.41■□□□□ 0.7
PRKCAP17252 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRKCAP17252 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRKCAP17252 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.41■□□□□ 0.7
PRKCAP17252 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRKCAP17252 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRKCAP17252 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRKCAP17252 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRKCAP17252 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRKCAP17252 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.4■□□□□ 0.7
PRKCAP17252 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRKCAP17252 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRKCAP17252 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRKCAP17252 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PRKCAP17252 TPRG1LP1-201ENST00000598702 760 ntBASIC19.4■□□□□ 0.7
PRKCAP17252 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRKCAP17252 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.4■□□□□ 0.7
PRKCAP17252 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRKCAP17252 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
PRKCAP17252 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRKCAP17252 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PRKCAP17252 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKCAP17252 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKCAP17252 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.39■□□□□ 0.69
PRKCAP17252 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKCAP17252 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.39■□□□□ 0.69
PRKCAP17252 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRKCAP17252 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRKCAP17252 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PRKCAP17252 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKCAP17252 AC007952.6-201ENST00000573168 2673 ntBASIC19.38■□□□□ 0.69
PRKCAP17252 AC003957.1-201ENST00000625108 2673 ntBASIC19.38■□□□□ 0.69
PRKCAP17252 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms