Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF728P0DKX0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF728P0DKX0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 TSPY26P-201ENST00000476365 1326 ntBASIC17.88■□□□□ 0.45
ZNF728P0DKX0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF728P0DKX0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF728P0DKX0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 AC104564.3-201ENST00000582367 638 ntBASIC17.86■□□□□ 0.45
ZNF728P0DKX0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms