Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
MT-ND1P03886 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.82■□□□□ 0.76
MT-ND1P03886 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.82■□□□□ 0.76
MT-ND1P03886 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.82■□□□□ 0.76
MT-ND1P03886 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.82■□□□□ 0.76
MT-ND1P03886 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.82■□□□□ 0.76
MT-ND1P03886 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MT-ND1P03886 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.82■□□□□ 0.76
MT-ND1P03886 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.82■□□□□ 0.76
MT-ND1P03886 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
MT-ND1P03886 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.82■□□□□ 0.76
MT-ND1P03886 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND1P03886 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.82■□□□□ 0.76
MT-ND1P03886 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MT-ND1P03886 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MT-ND1P03886 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-ND1P03886 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-ND1P03886 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND1P03886 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.81■□□□□ 0.76
MT-ND1P03886 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MT-ND1P03886 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND1P03886 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND1P03886 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND1P03886 MIR3621-201ENST00000580529 85 ntBASIC19.81■□□□□ 0.76
MT-ND1P03886 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND1P03886 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.81■□□□□ 0.76
MT-ND1P03886 AC133637.1-201ENST00000624115 1537 ntBASIC19.81■□□□□ 0.76
MT-ND1P03886 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND1P03886 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MT-ND1P03886 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 AFG3L1P-217ENST00000557444 2447 ntBASIC19.8■□□□□ 0.76
MT-ND1P03886 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND1P03886 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND1P03886 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.8■□□□□ 0.76
MT-ND1P03886 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.8■□□□□ 0.76
MT-ND1P03886 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.8■□□□□ 0.76
MT-ND1P03886 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.8■□□□□ 0.76
MT-ND1P03886 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.8■□□□□ 0.76
MT-ND1P03886 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MT-ND1P03886 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MT-ND1P03886 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.79■□□□□ 0.76
MT-ND1P03886 AC073314.1-201ENST00000568729 2216 ntBASIC19.79■□□□□ 0.76
MT-ND1P03886 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND1P03886 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
MT-ND1P03886 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.79■□□□□ 0.76
MT-ND1P03886 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND1P03886 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.79■□□□□ 0.76
MT-ND1P03886 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MT-ND1P03886 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MT-ND1P03886 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.78■□□□□ 0.76
MT-ND1P03886 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
MT-ND1P03886 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MT-ND1P03886 AC006455.2-201ENST00000429931 906 ntBASIC19.78■□□□□ 0.76
MT-ND1P03886 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.78■□□□□ 0.76
MT-ND1P03886 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.78■□□□□ 0.76
MT-ND1P03886 AC099791.2-201ENST00000605725 427 ntBASIC19.78■□□□□ 0.76
MT-ND1P03886 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MT-ND1P03886 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MT-ND1P03886 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND1P03886 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
MT-ND1P03886 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
MT-ND1P03886 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.77■□□□□ 0.76
MT-ND1P03886 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MT-ND1P03886 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms